commit: f040325d9ef33ba1c90bfa955b22ca51c8c9f7ff Author: David Seifert <soap <AT> gentoo <DOT> org> AuthorDate: Thu Jul 7 19:57:04 2022 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Thu Jul 7 19:57:04 2022 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f040325d
sci-biology/phred: update EAPI 6 -> 8 Signed-off-by: David Seifert <soap <AT> gentoo.org> ...red-071220-r1.ebuild => phred-071220-r2.ebuild} | 24 +++++++++------------- 1 file changed, 10 insertions(+), 14 deletions(-) diff --git a/sci-biology/phred/phred-071220-r1.ebuild b/sci-biology/phred/phred-071220-r2.ebuild similarity index 69% rename from sci-biology/phred/phred-071220-r1.ebuild rename to sci-biology/phred/phred-071220-r2.ebuild index bf7a0c7338cb..9d7ff9a1f6c8 100644 --- a/sci-biology/phred/phred-071220-r1.ebuild +++ b/sci-biology/phred/phred-071220-r2.ebuild @@ -1,28 +1,23 @@ -# Copyright 1999-2019 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=8 inherit toolchain-funcs DESCRIPTION="A base caller for Sanger DNA sequencing" HOMEPAGE="http://phrap.org/phredphrapconsed.html"; SRC_URI="phred-dist-071220.b-acd.tar.gz" +S="${WORKDIR}" LICENSE="phrap" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="" - -S="${WORKDIR}" - RESTRICT="fetch" + PATCHES=( - "${FILESDIR}/${PN}-071220-fix-build-system.patch" - "${FILESDIR}/${PN}-071220-fix-qa.patch" + "${FILESDIR}"/${PN}-071220-fix-build-system.patch + "${FILESDIR}"/${PN}-071220-fix-qa.patch ) pkg_nofetch() { @@ -39,11 +34,12 @@ src_compile() { src_install() { dobin phred daev - insinto /usr/share/${PN} + insinto /usr/share/phred doins phredpar.dat - echo "PHRED_PARAMETER_FILE=${EPREFIX}/usr/share/${PN}/phredpar.dat" > 99phred || die - doenvd 99phred + newenvd - 99phred <<- EOF + PHRED_PARAMETER_FILE="${EPREFIX}/usr/share/phred/phredpar.dat" + EOF newdoc DAEV.DOC DAEV.DOC.txt newdoc PHRED.DOC PHRED.DOC.txt
