jlec 14/11/13 10:58:13 Modified: ChangeLog Added: theseus-3.0.0.ebuild Log: sci-chemistry/theseus: Version Bump (Portage version: 2.2.14/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.9 sci-chemistry/theseus/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/theseus/ChangeLog?rev=1.9&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/theseus/ChangeLog?rev=1.9&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/theseus/ChangeLog?r1=1.8&r2=1.9 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/theseus/ChangeLog,v retrieving revision 1.8 retrieving revision 1.9 diff -u -r1.8 -r1.9 --- ChangeLog 6 Jun 2013 14:17:55 -0000 1.8 +++ ChangeLog 13 Nov 2014 10:58:13 -0000 1.9 @@ -1,6 +1,11 @@ # ChangeLog for sci-chemistry/theseus -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/theseus/ChangeLog,v 1.8 2013/06/06 14:17:55 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/theseus/ChangeLog,v 1.9 2014/11/13 10:58:13 jlec Exp $ + +*theseus-3.0.0 (13 Nov 2014) + + 13 Nov 2014; Justin Lecher <[email protected]> +theseus-3.0.0.ebuild: + Version Bump *theseus-2.0.6 (06 Jun 2013) 1.1 sci-chemistry/theseus/theseus-3.0.0.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/theseus/theseus-3.0.0.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/theseus/theseus-3.0.0.ebuild?rev=1.1&content-type=text/plain Index: theseus-3.0.0.ebuild =================================================================== # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/theseus/theseus-3.0.0.ebuild,v 1.1 2014/11/13 10:58:13 jlec Exp $ EAPI=5 inherit multilib toolchain-funcs DESCRIPTION="Maximum likelihood superpositioning and analysis of macromolecular structures" HOMEPAGE="http://www.theseus3d.org/"; SRC_URI="http://www.theseus3d.org/src/${PN}_${PV}.tar.gz"; SLOT="0" LICENSE="GPL-3" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="examples" RDEPEND=" sci-libs/gsl || ( sci-biology/muscle sci-biology/probcons sci-biology/mafft sci-biology/t-coffee sci-biology/kalign sci-biology/clustalw )" DEPEND="${RDEPEND} virtual/pkgconfig" S="${WORKDIR}"/${PN}_src/ src_prepare() { cat >> make.inc <<- EOF ARCH = $(tc-getAR) ARCHFLAGS = -rvs RANLIB = $(tc-getRANLIB) LOCALLIBDIR = "${EPREFIX}/usr/$(get_libdir) SYSLIBS = $(pkg-config --libs gsl) -lpthread LIBS = -ldistfit -lmsa -ldssplite -ldltmath -lDLTutils -ltheseus LIBDIR = -L./lib INSTALLDIR = "${ED}"/usr/bin OPT = WARN = CFLAGS = ${CFLAGS} -std=c11 \$(WARN) CC = $(tc-getCC) EOF sed \ -e 's|theseus:|theseus: libs|g' \ -e '/-o theseus/s:$(CC):$(CC) ${LDFLAGS}:g' \ -i Makefile || die sed \ -e 's:/usr/bin/sed:sed:g' \ -e "s:/usr/local/bin/:/usr/bin/:g" \ -e "s:/usr/bin/:${EPREFIX}/usr/bin/:g" \ -i theseus_align || die } src_install() { dobin theseus theseus_align dodoc theseus_man.pdf README AUTHORS use examples && insinto /usr/share/${PN} && doins -r examples }
