[gentoo-commits] proj/sci:master commit in: sci-biology/samri/

[Andrew Ammerlaan]

commit:     1d39e474755e118738efb60eb467eefdfe25c026
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Wed Jan 26 17:48:24 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Jan 26 17:48:24 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1d39e474

sci-biology/samri: bump python compat

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-biology/samri/samri-0.5.ebuild | 21 ++++++++++-----------
 1 file changed, 10 insertions(+), 11 deletions(-)

diff --git a/sci-biology/samri/samri-0.5.ebuild 
b/sci-biology/samri/samri-0.5.ebuild
index 84161f65f..1633aa23f 100644
--- a/sci-biology/samri/samri-0.5.ebuild
+++ b/sci-biology/samri/samri-0.5.ebuild
@@ -1,25 +1,25 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{7..8} )
+PYTHON_COMPAT=( python3_{8..9} )
 
 inherit distutils-r1 prefix
 
 DESCRIPTION="Small Animal Magnetic Resonance Imaging"
 HOMEPAGE="https://github.com/IBT-FMI/SAMRI";
 SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz"
+S="${WORKDIR}/SAMRI-${PV}"
 
 LICENSE="GPL-3"
 SLOT="0"
-IUSE="+atlases labbookdb test"
 KEYWORDS="~amd64"
-RESTRICT="!test? ( test )"
+IUSE="+atlases labbookdb"
+REQUIRED_USE="test? ( atlases )"
 
 DEPEND="
        test? (
-               dev-python/pytest[${PYTHON_USEDEP}]
                sci-biology/samri_bidsdata
                sci-biology/samri_bindata
                )
@@ -48,14 +48,13 @@ RDEPEND="
        sci-biology/nilearn[${PYTHON_USEDEP}]
 "
 
-REQUIRED_USE="test? ( atlases )"
-
-S="${WORKDIR}/SAMRI-${PV}"
+distutils_enable_tests pytest
+distutils_enable_sphinx doc/source dev-python/sphinxcontrib-napoleon
 
 src_prepare() {
        distutils-r1_src_prepare
-       sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ 
samri`
-       sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ 
test_scripts.sh`
+       sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ 
samri` || die
+       sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ 
test_scripts.sh` || die
        eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX samri/* test_scripts.sh)
 }
 
@@ -68,5 +67,5 @@ python_test() {
        sed -i -e \
                "/def test_bru2bids():/i...@pytest.mark.skip('Removed in full 
test suite, as this is already tested in `test_scripts.sh`')" \
                samri/pipelines/tests/test_repos.py || die
-       pytest -vv -k "not longtime" || die
+       epytest -k "not longtime"
 }