commit: 404741c6b93fd5423b3e3d7488d093b361953a99 Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> AuthorDate: Tue Aug 31 09:21:13 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> CommitDate: Tue Aug 31 09:21:13 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=404741c6
sci-biology/rum: remove last-rited pack Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> profiles/package.mask | 2 -- sci-biology/rum/metadata.xml | 15 --------------- sci-biology/rum/rum-2.0.5.06.ebuild | 30 ------------------------------ 3 files changed, 47 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index 6b58c272e..789da8f84 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -38,5 +38,3 @@ # Perhaps these packages work with the newer ncbi-tools++? If anyone is actively # using these packages please open a bug report sci-chemistry/talosn -# revdep of seqclean -sci-biology/rum diff --git a/sci-biology/rum/metadata.xml b/sci-biology/rum/metadata.xml deleted file mode 100644 index 032147c48..000000000 --- a/sci-biology/rum/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">itmat/rum</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/rum/rum-2.0.5.06.ebuild b/sci-biology/rum/rum-2.0.5.06.ebuild deleted file mode 100644 index 7234c72e7..000000000 --- a/sci-biology/rum/rum-2.0.5.06.ebuild +++ /dev/null @@ -1,30 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit perl-module - -DESCRIPTION="RNA-Seq Unified Mapper (digital normalization)" -HOMEPAGE="https://github.com/itmat/rum/wiki"; -SRC_URI="https://github.com/itmat/rum/archive/v$(ver_rs 3-4 _).tar.gz -> ${P}.tar.gz" - -LICENSE="UPennState" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -DEPEND=" - dev-perl/Log-Log4perl - virtual/perl-autodie" -RDEPEND="${DEPEND} - sci-biology/seqclean - sci-biology/blat - sci-biology/bowtie - sci-biology/seqclean" - -S="${WORKDIR}/${PN}-$(ver_rs 3-4 _)" - -src_install(){ - default - rm "${ED}"/usr/lib64/perl5/vendor_perl/*/RUM/{bowtie,blat,mdust} ]] || die -}
