commit: da853fc6e6037207166108a7e7b76c74cda34360 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Sat Mar 6 14:54:52 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Sat Mar 6 14:54:52 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=da853fc6
sci-biology/stringtie: EAPI bump, version bump Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> sci-biology/stringtie/stringtie-2.1.5.ebuild | 29 ++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/sci-biology/stringtie/stringtie-2.1.5.ebuild b/sci-biology/stringtie/stringtie-2.1.5.ebuild new file mode 100644 index 000000000..9b1e205da --- /dev/null +++ b/sci-biology/stringtie/stringtie-2.1.5.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +DESCRIPTION="Transcriptome assembler and RNA-Seq analysis on BAM files aka cufflinks" +HOMEPAGE="https://ccb.jhu.edu/software/stringtie + https://github.com/gpertea/stringtie"; +SRC_URI="https://github.com/gpertea/stringtie/releases/download/v${PV}/${P}.tar.gz"; + +LICENSE="Artistic-2 MIT" # MIT from bundled samtools-0.1.18 +SLOT="0" +KEYWORDS="~amd64 ~x86" + +# requires network +RESTRICT="test" + +# contains bundled and modified samtools-0.1.18 +# https://github.com/gpertea/stringtie/issues/185#issuecomment-400128090 +# +# contains bundled gclib (0.9.8?), a modified version? +# https://github.com/gpertea/stringtie/issues/186#issuecomment-400131844 +DEPEND="" +RDEPEND="${DEPEND}" + +src_install(){ + dobin stringtie + einstalldocs +}
