commit: b56ce20506d4fe815bbf3ceef0c39e387023b63a Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Sat Mar 6 09:42:54 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Sat Mar 6 09:42:54 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b56ce205
sci-biology/bismark: drop old Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> sci-biology/bismark/bismark-0.13.0.ebuild | 31 ------------------------------- 1 file changed, 31 deletions(-) diff --git a/sci-biology/bismark/bismark-0.13.0.ebuild b/sci-biology/bismark/bismark-0.13.0.ebuild deleted file mode 100644 index 98aa75a61..000000000 --- a/sci-biology/bismark/bismark-0.13.0.ebuild +++ /dev/null @@ -1,31 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit toolchain-funcs - -DESCRIPTION="Map bisulfite converted sequence reads and cytosine methylation states" -HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/bismark/"; -SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/${PN}/${PN}_v${PV}.tar.gz"; - -LICENSE="GPL-3+" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="+doc" - -DEPEND="" -RDEPEND="sci-biology/bowtie" - -S="${WORKDIR}/${PN}_v${PV}" - -src_install() { - dobin \ - bismark{,2bedGraph,2report,_genome_preparation,_methylation_extractor} \ - coverage2cytosine deduplicate_bismark - insinto /usr/share/${P} - doins bismark_sitrep.tpl - dosym ../share/${P}/bismark_sitrep.tpl /usr/bin/bismark_sitrep.tpl - use doc \ - dodoc Bismark_User_Guide.pdf RRBS_Guide.pdf license.txt RELEASE_NOTES.txt -}
