commit: c44ea8d6395168758086128b84363632aa238789 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Wed Mar 3 12:31:08 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Wed Mar 3 12:31:08 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c44ea8d6
sci-biology/Sibelia: remove py2.7 rdep package Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> profiles/package.mask | 10 ---------- sci-biology/Sibelia/Sibelia-9999.ebuild | 34 --------------------------------- sci-biology/Sibelia/metadata.xml | 12 ------------ 3 files changed, 56 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index 5124e1816..d39812beb 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -29,13 +29,3 @@ ## app-misc/some-package #--- END OF EXAMPLES --- - -# Sam James <[email protected]> (2021-02-12) -# These versions need Python 2.7 -# Unspecified whether at build time (okay for now) or runtime (not) -# -# Andrew Ammerlaan <[email protected]> (2021-02-13) -# Checked the code, this is a **runtime** dependency. Upstream also -# specifies this in their README file. -# Removal in 14 days -=sci-biology/Sibelia-9999 diff --git a/sci-biology/Sibelia/Sibelia-9999.ebuild b/sci-biology/Sibelia/Sibelia-9999.ebuild deleted file mode 100644 index 9235b5abb..000000000 --- a/sci-biology/Sibelia/Sibelia-9999.ebuild +++ /dev/null @@ -1,34 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python2_7 ) - -inherit cmake git-r3 - -DESCRIPTION="Draw synteny plots using circos" -HOMEPAGE="http://bioinf.spbau.ru/en/sibelia"; -EGIT_REPO_URI="https://github.com/bioinf/Sibelia.git"; - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="" - -DEPEND=" - dev-lang/perl - dev-libs/boost:0 - dev-cpp/tclap - >=dev-libs/libdivsufsort-2.0.1 - sci-biology/seqan:* - sci-biology/lagan - >=sci-biology/SnpEff-3.3" -# https://github.com/bioinf/Sibelia/issues/181 -# it contains bundled copies of all the above -# we would need to create also a Gentoo package for D3.js -# (BSD License) http://d3js.org -# it links using bundled libdivsufsort-2.0.1/lib/libdivsufsort.a -# it install stuff into /usr/lib/Sibelia/{lagan,snpEff}/ -RDEPEND="${DEPEND}" - -S="${WORKDIR}/${P}/src" diff --git a/sci-biology/Sibelia/metadata.xml b/sci-biology/Sibelia/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/Sibelia/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata>
