commit: d4d0d1524160afa9709b58edeb13c0dd1eff7c9f Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Mon Feb 1 04:51:13 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Mon Feb 1 04:51:13 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d4d0d152
sci-biology/scaffold_builder: drop pack, py2 only checked the code, and this is still py2 style Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> sci-biology/scaffold_builder/metadata.xml | 15 --------- .../scaffold_builder/scaffold_builder-2.2.ebuild | 39 ---------------------- 2 files changed, 54 deletions(-) diff --git a/sci-biology/scaffold_builder/metadata.xml b/sci-biology/scaffold_builder/metadata.xml deleted file mode 100644 index 0f267b755..000000000 --- a/sci-biology/scaffold_builder/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild b/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild deleted file mode 100644 index 9f60e82c6..000000000 --- a/sci-biology/scaffold_builder/scaffold_builder-2.2.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python2_7 ) - -inherit python-r1 - -DESCRIPTION="Combine FASTA contigs from a de novo assembly into scaffolds" -HOMEPAGE=" - https://sourceforge.net/projects/scaffold-b - https://edwards.sdsu.edu/scaffold_builder"; -SRC_URI=" - https://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v${PV}.zip - https://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v2_help.doc - https://downloads.sourceforge.net/project/scaffold-b/Manual_v2.1.pdf"; - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="~amd64" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND="${PYTHON_DEPS} - sci-biology/mummer" -DEPEND="${RDEPEND}" -BDEPEND="app-arch/unzip" - -S="${WORKDIR}" - -src_install(){ - echo "#! /usr/bin/env python" > scaffold_builder.pyy || die - cat scaffold_builder.py >> scaffold_builder.pyy || die - mv scaffold_builder.pyy scaffold_builder.py || die - python_foreach_impl python_doscript scaffold_builder.py - dodoc "${DISTDIR}"/scaffold_builder_v2_help.doc - newdoc "${DISTDIR}"/Manual_v2.1.pdf scaffold_builder.pdf -}
