commit: 1ba821353e070230c025ef642561fbd694a9537b Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Tue Jan 19 13:35:12 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Tue Jan 19 13:35:12 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=1ba82135
sci-biology/geneid: remove pack, upstream gone Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> profiles/package.mask | 1 - sci-biology/geneid/files/Makefile.patch | 11 ----------- sci-biology/geneid/geneid-1.4.4.ebuild | 31 ------------------------------- sci-biology/geneid/metadata.xml | 12 ------------ 4 files changed, 55 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index 2af4b4791..79f840453 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -62,4 +62,3 @@ sci-biology/FLASH sci-biology/fsa sci-biology/GAL sci-biology/gap2caf -sci-biology/geneid diff --git a/sci-biology/geneid/files/Makefile.patch b/sci-biology/geneid/files/Makefile.patch deleted file mode 100644 index bd6a8667a..000000000 --- a/sci-biology/geneid/files/Makefile.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- geneid/Makefile 2014-06-17 11:37:07.000000000 +0200 -+++ geneid/Makefile 2014-06-17 11:37:27.000000000 +0200 -@@ -13,7 +13,7 @@ - PROGRAM= geneid - PRODUCT= $(BIN)/$(PROGRAM) - CC=gcc --OPTS=-I$(INCLUDE) -Wall -O3 -+OPTS=$(CFLAGS) -I$(INCLUDE) - #OPTS=-I$(INCLUDE) -Wall -g - ####### - diff --git a/sci-biology/geneid/geneid-1.4.4.ebuild b/sci-biology/geneid/geneid-1.4.4.ebuild deleted file mode 100644 index 2ee9478ca..000000000 --- a/sci-biology/geneid/geneid-1.4.4.ebuild +++ /dev/null @@ -1,31 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils - -DESCRIPTION="An ab initio exon/gene finding program" -HOMEPAGE="http://genome.crg.es/software/geneid"; -SRC_URI="ftp://genome.crg.es/pub/software/geneid/geneid_v1.4.4.Jan_13_2011.tar.gz"; - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="${DEPEND}" - -S="${WORKDIR}"/"${PN}" - -src_prepare() { - epatch "${FILESDIR}"/Makefile.patch -} - -src_install() { - dobin bin/geneid - dohtml docs/*.html - dohtml -r docs/chapter* - dohtml -r docs/images -} diff --git a/sci-biology/geneid/metadata.xml b/sci-biology/geneid/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/geneid/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata>
