commit: 3cba6c804e2e0d0177c238f41556a8f2ede57251
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Jan 2 13:44:32 2021 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Jan 3 06:25:30 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=3cba6c80
sci-biology/ruffus: version bump, bump py targets, enable sphinx
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
.../{ruffus-2.6.3.ebuild => ruffus-2.8.4.ebuild} | 20 +++++++++++--------
sci-biology/ruffus/ruffus-9999.ebuild | 23 ----------------------
2 files changed, 12 insertions(+), 31 deletions(-)
diff --git a/sci-biology/ruffus/ruffus-2.6.3.ebuild
b/sci-biology/ruffus/ruffus-2.8.4.ebuild
similarity index 52%
rename from sci-biology/ruffus/ruffus-2.6.3.ebuild
rename to sci-biology/ruffus/ruffus-2.8.4.ebuild
index b4417d29c..beda7db9a 100644
--- a/sci-biology/ruffus/ruffus-2.6.3.ebuild
+++ b/sci-biology/ruffus/ruffus-2.8.4.ebuild
@@ -1,22 +1,26 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
-PYTHON_COMPAT=( python2_7 )
+PYTHON_COMPAT=( python3_{7,8,9} )
inherit distutils-r1
DESCRIPTION="Python module to support computational pipelines"
HOMEPAGE="http://www.ruffus.org.uk";
SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-# [email protected]:bunbun/ruffus.git
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-IUSE=""
-DEPEND="dev-python/setuptools[${PYTHON_USEDEP}]
- media-gfx/graphviz"
-RDEPEND="${DEPEND}"
+# TODO: why does this not work: Duplicate pipeline
+RESTRICT="test"
+
+RDEPEND="
+ media-gfx/graphviz
+"
+
+distutils_enable_sphinx doc dev-python/sphinx_rtd_theme
+distutils_enable_tests pytest
diff --git a/sci-biology/ruffus/ruffus-9999.ebuild
b/sci-biology/ruffus/ruffus-9999.ebuild
deleted file mode 100644
index 9c12d9170..000000000
--- a/sci-biology/ruffus/ruffus-9999.ebuild
+++ /dev/null
@@ -1,23 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 git-r3
-
-DESCRIPTION="Python module to support computational pipelines"
-HOMEPAGE="http://www.ruffus.org.uk";
-#
SRC_URI="http://code.google.com/p/ruffus/downloads/detail?name=ruffus-2.4beta3.tar.gz";
-EGIT_REPO_URI="https://code.google.com/archive/p/ruffus";
-# [email protected]:bunbun/ruffus.git
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-DEPEND="dev-python/setuptools[${PYTHON_USEDEP}]
- media-gfx/graphviz"
-RDEPEND="${DEPEND}"
