commit: f8c18e63a7bd3240ee469df7638e037c8b3e6b64 Author: Horea Christian <chr <AT> chymera <DOT> eu> AuthorDate: Sun Sep 27 20:57:50 2020 +0000 Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> CommitDate: Sun Sep 27 20:57:50 2020 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f8c18e63
sci-biology/pb-honey: removed discontinued package Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Horea Christian <chr <AT> chymera.eu> sci-biology/pb-honey/metadata.xml | 15 --------------- sci-biology/pb-honey/pb-honey-14.1.15.ebuild | 25 ------------------------- 2 files changed, 40 deletions(-) diff --git a/sci-biology/pb-honey/metadata.xml b/sci-biology/pb-honey/metadata.xml deleted file mode 100644 index 1b533d8a5..000000000 --- a/sci-biology/pb-honey/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pb-jelly</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/pb-honey/pb-honey-14.1.15.ebuild b/sci-biology/pb-honey/pb-honey-14.1.15.ebuild deleted file mode 100644 index 1a4e10778..000000000 --- a/sci-biology/pb-honey/pb-honey-14.1.15.ebuild +++ /dev/null @@ -1,25 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 - -DESCRIPTION="Structural variant identification (SNV) using long reads (over 10kbp)" -HOMEPAGE="https://www.hgsc.bcm.edu/software/honey"; -SRC_URI="http://sourceforge.net/projects/pb-jelly/files/PBHoney/PBHoney_14.1.15.tgz"; - -LICENSE="BSD-2" -SLOT="0" -KEYWORDS="" -IUSE="" - -DEPEND=" - sci-biology/blasr - sci-biology/pysam[${PYTHON_USEDEP}] - sci-biology/samtools:0[${PYTHON_USEDEP}] - dev-python/h5py[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}]" -RDEPEND="${DEPEND}"
