commit: b118528394ea931b4732e27b266bc38a5d1c0ff1
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 13 23:12:53 2020 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 13 23:12:53 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b1185283
sci-biology/gatk: updated license, copyright, and ebuild style
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-biology/gatk/gatk-3.8.1.ebuild | 8 +++-----
sci-biology/gatk/gatk-9999.ebuild | 13 +++++--------
2 files changed, 8 insertions(+), 13 deletions(-)
diff --git a/sci-biology/gatk/gatk-3.8.1.ebuild
b/sci-biology/gatk/gatk-3.8.1.ebuild
index f46c1d322..9ad24d86c 100644
--- a/sci-biology/gatk/gatk-3.8.1.ebuild
+++ b/sci-biology/gatk/gatk-3.8.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -17,19 +17,17 @@ EGIT_COMMIT="41147a655594c2aae6e2cad8462bd1648570b32b"
LICENSE="MIT"
SLOT="0"
-IUSE=""
KEYWORDS="~amd64" # 608.21 MiB git download and 134MB "${W}"/.m2 download
-COMMON_DEPS=""
DEPEND="
>=virtual/jdk-1.6
dev-java/maven-bin:* || ( dev-java/netbeans-java )
dev-java/cofoja
- ${COMMON_DEPS}"
+ "
RDEPEND="
>=virtual/jre-1.6
>=sci-biology/SnpEff-2.0.5
- ${COMMON_DEPS}"
+ "
#S="${WORKDIR}/${PN}-${MY_PV}"
diff --git a/sci-biology/gatk/gatk-9999.ebuild
b/sci-biology/gatk/gatk-9999.ebuild
index fc9db8986..70d42cb0a 100644
--- a/sci-biology/gatk/gatk-9999.ebuild
+++ b/sci-biology/gatk/gatk-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -14,16 +14,13 @@ EGIT_CLONE_TYPE="mirror"
# building outside of git is not possible,
# see https://github.com/broadinstitute/picard/issues/605
#
-#
+#
# must run 'git clone https://github.com/broadinstitute/gatk.git gatk'
# see https://github.com/broadinstitute/gatk/issues/4687
-LICENSE="BSD-3" # since gatk-4
+LICENSE="BSD" # since gatk-4
SLOT="0"
-IUSE=""
-KEYWORDS="" # 148.19 MB git download and 134MB "${W}"/.m2 download
-COMMON_DEPS=""
# gatk-4 needs java-1.8
DEPEND="
>=virtual/jdk-1.8
@@ -31,12 +28,12 @@ DEPEND="
>=dev-vcs/git-lfs-1.1.0
>=dev-java/maven-bin-3.1:* || ( dev-java/netbeans-java )
dev-java/cofoja
- ${COMMON_DEPS}"
+ "
RDEPEND="
>=virtual/jre-1.8
>=sci-biology/SnpEff-2.0.5
>=dev-lang/R-3.2.5
- ${COMMON_DEPS}"
+ "
#S="${WORKDIR}/${PN}-${MY_PV}"
