commit: d9681e53572f2acdade2520930f4d64c42900e01 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Wed Jan 15 08:41:42 2020 +0000 Commit: Benda XU <heroxbd <AT> gentoo <DOT> org> CommitDate: Sat Jan 25 03:51:35 2020 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d9681e53
dev-python/h5py: Version bump 2.10.0 Closes: https://github.com/gentoo/gentoo/pull/14343 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> Signed-off-by: Benda Xu <heroxbd <AT> gentoo.org> dev-python/h5py/Manifest | 1 + dev-python/h5py/files/h5py-2.10.0-tests.patch | 32 ++++++++++++++ dev-python/h5py/h5py-2.10.0.ebuild | 63 +++++++++++++++++++++++++++ 3 files changed, 96 insertions(+) diff --git a/dev-python/h5py/Manifest b/dev-python/h5py/Manifest index c360c86ed4f..8853c4df188 100644 --- a/dev-python/h5py/Manifest +++ b/dev-python/h5py/Manifest @@ -1,3 +1,4 @@ +DIST h5py-2.10.0.tar.gz 301057 BLAKE2B 2e9da02224493b79b2df75ff9aa5cb16ab668d07bb95066356749be09091c54032efb3db8b53bdf0fbbbac2bcde532f9f051627327dcf3f35fb578b701ecc165 SHA512 c49b04f7dcddf03f36d4f063d79ecbe544e0b1daee432d4a76cfa83dac3a1f2cb144f40a74fb85ea17cb5b778f57f709969ea5d1a2afc5bdd5aecbc9d732898d DIST h5py-2.7.0.tar.gz 256471 BLAKE2B c232eb86d00b9d1bb76903ea04bfd384bae7c9eb7b301de6aa450a46918f69132ab8d8d5a3f9b54095feee436a8aa9e9045c27ca1a120d665d6031c14218f0f5 SHA512 7c1e5d8b47c176521f5f62cfc4f782c09a0e003c5cbc07a673ccc3dfbe97df930b33801ef7311360892e3fad1d7d72561a8578aed9cb630d44e1a73543bb5da4 DIST h5py-2.7.1.tar.gz 264225 BLAKE2B ffb0b52127f6cb9634b5ac3266a36bc0003144d302bdc300fff5f6f33e52b5a12e954cc2ef9fdfe9dfa0eddc810b30ee3f556cab2a31338500db666b87e64ddc SHA512 b702e3875c2767d2fabe66601820c517671fb5fc3321334aba081950b625435a1262554f39187cd1b41c6069e2b3826db6f0b610bfed2abe5db8a4dd8a29ecfd DIST h5py-2.9.0.tar.gz 287853 BLAKE2B f1e5c985ec1431dca2b14490711ec7f125620e67ee6cecb56306d19cc8fd1d1c33d313f6477e98c4dbb780cc50c3a4ca073cfe69e079187f8f52a301aab60467 SHA512 73b1f59e3e2b3eceebf7b97e49bd8f5199afafd7ef29917af05ff8415c2f2129a5c59db9658944370c9bcf8fc04ab26948ee27fc6fd948a22d19cace1ce8c853 diff --git a/dev-python/h5py/files/h5py-2.10.0-tests.patch b/dev-python/h5py/files/h5py-2.10.0-tests.patch new file mode 100644 index 00000000000..9f810ed46f0 --- /dev/null +++ b/dev-python/h5py/files/h5py-2.10.0-tests.patch @@ -0,0 +1,32 @@ +These tests fail as confirmed by upstream. + +Reference: https://github.com/h5py/h5py/issues/1291 +Reference: https://github.com/gentoo/gentoo/pull/14343 + +diff --git a/h5py/tests/test_file2.py b/h5py/tests/test_file2.py +index 0fbf2d5..a7a28bb 100644 +--- a/h5py/tests/test_file2.py ++++ b/h5py/tests/test_file2.py +@@ -207,22 +207,6 @@ class TestFileObj(TestCase): + f.create_dataset('test', data=list(range(12))) + self.assertRaises(Exception, list, f['test']) + +- def test_exception_write(self): +- +- class BrokenBytesIO(io.BytesIO): +- def write(self, b): +- raise Exception('I am broken') +- +- f = h5py.File(BrokenBytesIO(), 'w') +- self.assertRaises(Exception, f.create_dataset, 'test', +- data=list(range(12))) +- self.assertRaises(Exception, f.close) +- +- def test_exception_close(self): +- fileobj = io.BytesIO() +- f = h5py.File(fileobj, 'w') +- fileobj.close() +- self.assertRaises(Exception, f.close) + + def test_method_vanish(self): + fileobj = io.BytesIO() diff --git a/dev-python/h5py/h5py-2.10.0.ebuild b/dev-python/h5py/h5py-2.10.0.ebuild new file mode 100644 index 00000000000..b9c906c3292 --- /dev/null +++ b/dev-python/h5py/h5py-2.10.0.ebuild @@ -0,0 +1,63 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{6,7} ) + +inherit distutils-r1 flag-o-matic + +DESCRIPTION="Simple Python interface to HDF5 files" +HOMEPAGE="https://www.h5py.org"; +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" + +IUSE="examples mpi" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" + +RDEPEND="sci-libs/hdf5:=[mpi=,hl(+)] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}]" + +BDEPEND="dev-python/pkgconfig + mpi? ( virtual/mpi )" + +DEPEND="dev-python/cython[${PYTHON_USEDEP}] + mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] ) + doc? ( dev-python/alabaster[${PYTHON_USEDEP}] ) + test? ( dev-python/QtPy[testlib,${PYTHON_USEDEP}] + dev-python/cached-property[${PYTHON_USEDEP}] )" + +PATCHES="${FILESDIR}/${P}-tests.patch" + +DOCS=( README.rst AUTHORS ANN.rst ) + +distutils_enable_tests setup.py +distutils_enable_sphinx docs --no-autodoc + +pkg_setup() { + use mpi && export CC=mpicc +} + +python_prepare_all() { + append-cflags -fno-strict-aliasing + distutils-r1_python_prepare_all +} + +python_configure() { + esetup.py configure $(usex mpi --mpi '') +} + +python_test() { + esetup.py test || die "Tests fail with ${EPYTHON}" + # tests generate .pytest_cache which should not be installed + rm -r "${BUILD_DIR}/lib/.pytest_cache" || die +} + +python_install_all() { + use examples && dodoc -r examples + + distutils-r1_python_install_all +}
