commit: e103d6b79375d4360b5e4e6766ce8fda6fd5f447 Author: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> AuthorDate: Sun Jan 12 17:54:32 2020 +0000 Commit: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> CommitDate: Sun Jan 12 17:54:32 2020 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e103d6b7
sci-mathematics/pymc: remove last-rited pkg Signed-off-by: Mikle Kolyada <zlogene <AT> gentoo.org> sci-mathematics/pymc/Manifest | 1 - .../files/pymc-2.3.6-remove-hardcoded-blas.patch | 11 ----- sci-mathematics/pymc/metadata.xml | 16 ------- sci-mathematics/pymc/pymc-2.3.6.ebuild | 54 ---------------------- 4 files changed, 82 deletions(-) diff --git a/sci-mathematics/pymc/Manifest b/sci-mathematics/pymc/Manifest deleted file mode 100644 index 090ed0a4d4e..00000000000 --- a/sci-mathematics/pymc/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST pymc-2.3.6.zip 402827 BLAKE2B e8ed875d84e8783f35f9186c6d7d659f29a49937896261a0f8bd892f324d2e17887ce37381aece8d97e47389edf7d727dc73a40ef6abfe4682a7bcbd1a768336 SHA512 4b5e0663ca296efd8d242a0b6362a12d475cdabf661a430de5455e60999acf8a4a30d053303c2f79e8aec3e5e7d120f56cb341e283aa87f31c224e4e57300d13 diff --git a/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch b/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch deleted file mode 100644 index 93ce86f5c71..00000000000 --- a/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/setup.py -+++ b/setup.py -@@ -80,7 +80,7 @@ - - # Compile covariance functions - config.add_extension(name='gp.cov_funs.isotropic_cov_funs',\ --sources=['pymc/gp/cov_funs/isotropic_cov_funs.f','blas/BLAS/dscal.f'],\ -+sources=['pymc/gp/cov_funs/isotropic_cov_funs.f'],\ - extra_info=lapack_info) - - config.add_extension(name='gp.cov_funs.distances',sources=['pymc/gp/cov_funs/distances.f'], extra_info=lapack_info) diff --git a/sci-mathematics/pymc/metadata.xml b/sci-mathematics/pymc/metadata.xml deleted file mode 100644 index 0b8c7cb3f0e..00000000000 --- a/sci-mathematics/pymc/metadata.xml +++ /dev/null @@ -1,16 +0,0 @@ -<?xml version='1.0' encoding='UTF-8'?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Benda Xu</name> - </maintainer> - <longdescription lang="en"> -PyMC is a python module that implements Bayesian statistical models -and fitting algorithms, including Markov chain Monte Carlo. - </longdescription> - <upstream> - <remote-id type="github">pymc-devs/pymc</remote-id> - <remote-id type="pypi">pymc</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-mathematics/pymc/pymc-2.3.6.ebuild b/sci-mathematics/pymc/pymc-2.3.6.ebuild deleted file mode 100644 index edc403020aa..00000000000 --- a/sci-mathematics/pymc/pymc-2.3.6.ebuild +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python{2_7,3_6} ) - -inherit distutils-r1 flag-o-matic fortran-2 toolchain-funcs - -DESCRIPTION="Markov Chain Monte Carlo sampling toolkit" -HOMEPAGE="https://github.com/${PN}-devs/${PN} https://pypi.org/project/${PN}"; -SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.zip" - -SLOT=0 -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -LICENSE=AFL-3.0 -IUSE="test" -RESTRICT="!test? ( test )" - -RDEPEND=">=dev-python/numpy-1.6[${PYTHON_USEDEP},lapack] - >=dev-python/matplotlib-1.0[${PYTHON_USEDEP}]" -DEPEND=" - test? ( - ${RDEPEND} - dev-python/nose[${PYTHON_USEDEP}] - )" - -PATCHES=( "${FILESDIR}/${PN}-2.3.6-remove-hardcoded-blas.patch" ) - -# tests freeze at some point -#RESTRICT="test" - -python_prepare_all() { - # forcibly remove bundled libs, just to be sure... - rm -r blas || die - - distutils-r1_python_prepare_all -} - -python_configure_all() { - append-fflags -fPIC - append-ldflags -shared - - [[ $(tc-getFC) == *gfortran* ]] && mydistutilsargs=( config_fc --fcompiler=gnu95 ) -} - -python_test() { - distutils_install_for_testing - cd "${TEST_DIR}" || die - # Use agg backend instead of gtk - echo 'backend : agg' > matplotlibrc || die - - ${EPYTHON} -c "import pymc; pymc.test()" || die "Tests failed on ${EPYTHON}" -}
