commit: 1f2569486e5080071fbcf33caa048c6fdd3a1747 Author: Michał Górny <mgorny <AT> gentoo <DOT> org> AuthorDate: Sun Dec 15 20:20:37 2019 +0000 Commit: Michał Górny <mgorny <AT> gentoo <DOT> org> CommitDate: Sun Dec 15 20:24:06 2019 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1f256948
sci-biology/gatk: Drop broken -9999 Signed-off-by: Michał Górny <mgorny <AT> gentoo.org> sci-biology/gatk/gatk-9999.ebuild | 40 --------------------------------------- 1 file changed, 40 deletions(-) diff --git a/sci-biology/gatk/gatk-9999.ebuild b/sci-biology/gatk/gatk-9999.ebuild deleted file mode 100644 index fee2670ad21..00000000000 --- a/sci-biology/gatk/gatk-9999.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -EANT_BUILD_TARGET="dist" -EANT_NEEDS_TOOLS="true" -JAVA_ANT_REWRITE_CLASSPATH="true" - -inherit git-2 java-pkg-2 java-ant-2 - -DESCRIPTION="The Genome Analysis Toolkit" -HOMEPAGE="http://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit"; -SRC_URI="" -EGIT_REPO_URI="https://github.com/broadgsa/gatk.git"; - -LICENSE="MIT" -SLOT="0" -IUSE="" -KEYWORDS="" - -COMMON_DEPS="" -DEPEND=" - >=virtual/jdk-1.6 - dev-vcs/git - ${COMMON_DEPS}" -RDEPEND=" - >=virtual/jre-1.6 - ${COMMON_DEPS}" - -src_prepare() { - sed -i '/property name="ivy.home"/ s|${user.home}|'${WORKDIR}'|' build.xml || die - java-pkg-2_src_prepare -} - -src_install() { - java-pkg_dojar dist/*.jar - java-pkg_dolauncher GenomeAnalysisTK --jar GenomeAnalysisTK.jar - java-pkg_dolauncher AnalyzeCovariates --jar AnalyzeCovariates.jar -}
