commit: 565f9b0c0ef3c2c6917d27a17495dbc279bc92de Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sat Mar 23 15:01:39 2019 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sat Mar 23 15:01:39 2019 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=565f9b0c
sci-biology/bamql: add IUSE="static-libs" Provided one specifies `--enable-static=no --enable-static-llvm=no` the patch in https://github.com/BoutrosLaboratory/bamql/commit/94417720bc7653a90cd9edd932ba6ba52d7bb89b is really needed (as these two args are enough to compile bamql-1.6 and llvm with only shared libs). See https://github.com/BoutrosLaboratory/bamql/issues/14 Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz> sci-biology/bamql/{bamql-1.5.ebuild => bamql-1.6.ebuild} | 15 +++++++++++---- sci-biology/bamql/bamql-9999.ebuild | 11 +++++++++-- 2 files changed, 20 insertions(+), 6 deletions(-) diff --git a/sci-biology/bamql/bamql-1.5.ebuild b/sci-biology/bamql/bamql-1.6.ebuild similarity index 53% rename from sci-biology/bamql/bamql-1.5.ebuild rename to sci-biology/bamql/bamql-1.6.ebuild index ef78e3753..535b31f44 100644 --- a/sci-biology/bamql/bamql-1.5.ebuild +++ b/sci-biology/bamql/bamql-1.6.ebuild @@ -1,19 +1,19 @@ -# Copyright 1999-2018 Gentoo Foundation +# Copyright 1999-2019 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=6 -inherit autotools +inherit autotools eutils DESCRIPTION="Extract reads from BAM files" HOMEPAGE="https://github.com/BoutrosLaboratory/bamql https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1162-y"; -SRC_URI="https://github.com/BoutrosLaboratory/bamql/archive/v1.5.tar.gz -> ${P}.tar.gz" +SRC_URI="https://github.com/BoutrosLaboratory/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" LICENSE="MIT" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" +IUSE="static-libs" DEPEND=" sys-devel/llvm:= @@ -26,3 +26,10 @@ src_prepare(){ eautoreconf default } + +src_configure(){ + local mycmakeargs=() + use static-libs && mycmakeargs+=( "--enable-static=yes" "--enable-static-llvm=yes" ) || \ + mycmakeargs+=( "--enable-static=no" "--enable-static-llvm=no" ) + econf ${mycmakeargs[@]} +} diff --git a/sci-biology/bamql/bamql-9999.ebuild b/sci-biology/bamql/bamql-9999.ebuild index 44a7d85f5..409804dc7 100644 --- a/sci-biology/bamql/bamql-9999.ebuild +++ b/sci-biology/bamql/bamql-9999.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2018 Gentoo Foundation +# Copyright 1999-2019 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=6 @@ -13,7 +13,7 @@ EGIT_REPO_URI="https://github.com/BoutrosLaboratory/bamql.git"; LICENSE="MIT" SLOT="0" KEYWORDS="" -IUSE="" +IUSE="static-libs" DEPEND=" sys-devel/llvm:= @@ -26,3 +26,10 @@ src_prepare(){ eautoreconf default } + +src_configure(){ + local mycmakeargs=() + use static-libs && mycmakeargs+=( "--enable-static=yes" "--enable-static-llvm=yes" ) || \ + mycmakeargs+=( "--enable-static=no" "--enable-static-llvm=no" ) + econf ${mycmakeargs[@]} +}
