commit: bdf54b77ee8152d9240e83ffe1250723bc199653
Author: Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Tue May 22 17:02:38 2018 +0000
Commit: Matthias Maier <tamiko <AT> gentoo <DOT> org>
CommitDate: Tue May 22 22:25:26 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bdf54b77
sci-visualization/paraview: version bump to 5.5.0
Package-Manager: Portage-2.3.38, Repoman-2.3.9
sci-visualization/paraview/Manifest | 1 +
.../paraview-5.5.0-allow_custom_build_type.patch | 18 ++
sci-visualization/paraview/paraview-5.5.0.ebuild | 281 +++++++++++++++++++++
sys-cluster/openmpi/Manifest | 1 +
4 files changed, 301 insertions(+)
diff --git a/sci-visualization/paraview/Manifest
b/sci-visualization/paraview/Manifest
index de7bfe7a43c..90a7a061616 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,2 +1,3 @@
DIST ParaView-v5.3.0.tar.gz 45173528 BLAKE2B
878e8dae0b5de4bee5d72a4a272a5048fa587fac8e949d39c8e040b9fe3553b787e53f183ae98d20f24755db7e355280b85a9f572037764c53740de2eb4a9e30
SHA512
3dc3c2a1c27a0f0dc82fc04ce84477a26aacb329d6ea42c276c4204e39d11bc78adbc1807e1e7168aade31aa48b6d628775841b8b94b5122084eac46e358a23f
DIST ParaView-v5.4.1.tar.gz 43783720 BLAKE2B
2197d7f390b7192eb58ad67b88c84119da35fc4229547a42ef12a600874304addb410d0a53684a785855f617011762bf6a819231821f0bff8ee226111df8e577
SHA512
6a720f9ed9e03b7b97f0e84bb6d67b2a28c4ffc5079427d544e9522ce313264eed273c9b7ae13b11e34ab4de903132a22bacc337452d1e9da9876416449520f5
+DIST ParaView-v5.5.0.tar.gz 51414419 BLAKE2B
832a01701d21f463c07186912501796756c2477063803fa3b2b67dbb9ac2c9db28a45a8b3d22077085255adf16eb429c3289093848b3712ebab46c0ae4c17956
SHA512
0915eac75a710736334fa9d436369a14546e2f90a1b55f9a0f7a96fedb94ced043d27576d2a179f275478be17e326cd3bee76f06266a776d586f6510722f3172
diff --git
a/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch
b/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch
new file mode 100644
index 00000000000..1549e58af86
--- /dev/null
+++
b/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch
@@ -0,0 +1,18 @@
+diff -urNd ParaView-v5.5.0/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt
ParaView-v5.5.0-fix/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt
+--- ParaView-v5.5.0/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt
2018-04-07 06:03:33.000000000 +1000
++++ ParaView-v5.5.0-fix/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt
2018-04-10 16:19:08.841144557 +1000
+@@ -21,14 +21,6 @@
+ set(CMAKE_BUILD_TYPE "Release")
+ endif()
+
+-string(TOLOWER "${CMAKE_BUILD_TYPE}" cmake_build_type_tolower)
+-if( NOT cmake_build_type_tolower STREQUAL "debug"
+- AND NOT cmake_build_type_tolower STREQUAL "release"
+- AND NOT cmake_build_type_tolower STREQUAL "relwithdebinfo")
+- message(FATAL_ERROR "Unknown build type \"${CMAKE_BUILD_TYPE}\". Allowed
values are Debug, Release, RelWithDebInfo (case-insensitive).")
+-endif()
+-
+-
+ #############################################################################
+ # retrieve version infomation #
+ #############################################################################
diff --git a/sci-visualization/paraview/paraview-5.5.0.ebuild
b/sci-visualization/paraview/paraview-5.5.0.ebuild
new file mode 100644
index 00000000000..580afbbb19f
--- /dev/null
+++ b/sci-visualization/paraview/paraview-5.5.0.ebuild
@@ -0,0 +1,281 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs
versionator
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org";
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz";
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql
nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+ mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL,
needed by vtkIOMySQL"
+
+RDEPEND="
+ app-arch/lz4
+ dev-libs/expat
+ dev-libs/jsoncpp
+ dev-libs/libxml2:2
+ dev-libs/protobuf
+ dev-libs/pugixml
+ media-libs/freetype
+ media-libs/glew:0
+ media-libs/libpng:0
+ media-libs/libtheora
+ media-libs/tiff:0=
+ sci-libs/cgnslib
+ sci-libs/hdf5[mpi=]
+ >=sci-libs/netcdf-4.2[hdf5]
+ >=sci-libs/netcdf-cxx-4.2:3
+ sci-libs/xdmf2
+ sys-libs/zlib
+ virtual/glu
+ virtual/jpeg:0
+ virtual/opengl
+ x11-libs/libX11
+ x11-libs/libXext
+ x11-libs/libXmu
+ x11-libs/libXt
+ coprocessing? (
+ plugins? (
+ dev-python/PyQt5
+ dev-qt/qtgui:5[-gles2]
+ )
+ )
+ ffmpeg? ( virtual/ffmpeg )
+ mpi? ( virtual/mpi[cxx,romio] )
+ mysql? ( virtual/mysql )
+ python? (
+ ${PYTHON_DEPS}
+ dev-python/constantly[${PYTHON_USEDEP}]
+ dev-python/incremental[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/pygments[${PYTHON_USEDEP}]
+ dev-python/sip[${PYTHON_USEDEP}]
+ dev-python/six[${PYTHON_USEDEP}]
+ dev-python/twisted-core[${PYTHON_USEDEP}]
+ dev-python/zope-interface[${PYTHON_USEDEP}]
+ mpi? ( dev-python/mpi4py )
+ qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
+ )
+ qt5? (
+ dev-qt/designer:5
+ dev-qt/qtgui:5[-gles2]
+ dev-qt/qthelp:5
+ dev-qt/qtopengl:5[-gles2]
+ dev-qt/qtsql:5
+ dev-qt/qttest:5
+ dev-qt/qtwebkit:5
+ dev-qt/qtx11extras:5
+ )
+ sqlite? ( dev-db/sqlite:3 )
+ tcl? ( dev-lang/tcl:0= )
+ tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+ ${PYTHON_DEPS}
+ >=dev-util/cmake-3.4
+ boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+ doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+PATCHES=(
+ "${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
+ "${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
+ "${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+)
+
+pkg_pretend() {
+ if [[ ${MERGE_TYPE} != "binary" ]] && use openmp && [[ $(tc-getCC)$ ==
*gcc* ]] && ! tc-has-openmp; then
+ eerror "For USE=openmp a gcc with openmp support is required"
+ eerror
+ return 1
+ fi
+}
+
+pkg_setup() {
+ python-single-r1_pkg_setup
+ PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+ cmake-utils_src_prepare
+
+ # lib64 fixes
+ sed -i \
+ -e "s:/lib/python:/$(get_libdir)/python:g" \
+ VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
+ sed -i \
+ -e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+
ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
+}
+
+src_configure() {
+ if use qt5; then
+ export QT_SELECT=qt5
+ fi
+
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
+ -DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+ -DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+ -DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+ -DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+ -DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+ -DBUILD_SHARED_LIBS=ON
+ -DCMAKE_COLOR_MAKEFILE=TRUE
+ -DCMAKE_VERBOSE_MAKEFILE=ON
+ -DVTK_Group_StandAlone=ON
+ -DVTK_RENDERING_BACKEND=OpenGL2
+ -DVTK_USE_FFMPEG_ENCODER=OFF
+ -DVTK_USE_OFFSCREEN=TRUE
+ # -DVTK_USE_SYSTEM_AUTOBAHN once we transitioned to Python 3...
+ -DVTK_USE_SYSTEM_CGNS=ON
+ -DVTK_USE_SYSTEM_PUGIXML=ON
+ -DVTK_USE_SYSTEM_EXPAT=ON
+ -DVTK_USE_SYSTEM_FREETYPE=ON
+ -DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified
sources
+ -DVTK_USE_SYSTEM_GLEW=ON
+ -DVTK_USE_SYSTEM_HDF5=ON
+ -DVTK_USE_SYSTEM_INCREMENTAL=ON
+ -DVTK_USE_SYSTEM_JPEG=ON
+ -DVTK_USE_SYSTEM_JSONCPP=ON
+ -DVTK_USE_SYSTEM_LIBHARU=OFF # doesn't compile, requires
modified sources
+ -DVTK_USE_SYSTEM_LIBXML2=ON
+ -DVTK_USE_SYSTEM_LZ4=ON
+ -DVTK_USE_SYSTEM_NETCDF=ON
+ -DVTK_USE_SYSTEM_OGGTHEORA=ON
+ -DVTK_USE_SYSTEM_PNG=ON
+ -DVTK_USE_SYSTEM_PROTOBUF=ON
+ -DVTK_USE_SYSTEM_TIFF=ON
+ -DVTK_USE_SYSTEM_XDMF2=ON
+ -DVTK_USE_SYSTEM_XDMF2=OFF
+ -DVTK_USE_SYSTEM_ZLIB=ON
+ # force this module due to incorrect build system deps
+ # wrt bug 460528
+ -DModule_vtkUtilitiesProcessXML=ON
+ )
+
+ mycmakeargs+=(
+ -DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
+
+ -DModule_vtkGUISupportQtOpenGL="$(usex qt5)"
+ -DModule_vtkGUISupportQtSQL="$(usex qt5)"
+ -DModule_vtkGUISupportQtWebkit="$(usex qt5)"
+ -DModule_vtkRenderingQt="$(usex qt5)"
+ -DModule_vtkViewsQt="$(usex qt5)"
+ -DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
+ -DVTK_Group_ParaViewQt="$(usex qt5)"
+ -DVTK_Group_Qt="$(usex qt5)"
+ -DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
+ $(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
+ -DVTK_USE_NVCONTROL="$(usex nvcontrol)"
+
+ -DModule_vtkInfovisBoost="$(usex boost)"
+
+ -DPARAVIEW_USE_ICE_T="$(usex mpi)"
+ -DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
+ -DPARAVIEW_USE_MPI="$(usex mpi)"
+ -DVTK_Group_MPI="$(usex mpi)"
+ -DVTK_XDMF_USE_MPI="$(usex mpi)"
+ -DXDMF_BUILD_MPI="$(usex mpi)"
+
+ -DModule_AutobahnPython="$(usex python)"
+ -DModule_pqPython="$(usex python)"
+ -DModule_Twisted="$(usex python)"
+ -DModule_vtkmpi4py="$(usex python)"
+ -DModule_vtkPython="$(usex python)"
+ -DModule_vtkWrappingPythonCore="$(usex python)"
+ -DModule_ZopeInterface="$(usex python)"
+ -DPARAVIEW_ENABLE_PYTHON="$(usex python)"
+ -DXDMF_WRAP_PYTHON="$(usex python)"
+
+ -DBUILD_DOCUMENTATION="$(usex doc)"
+
+ -DBUILD_EXAMPLES="$(usex examples)"
+
+ -DModule_vtkIOMySQL="$(usex mysql)"
+
+ -DModule_vtksqlite="$(usex sqlite)"
+
+ -DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
+
+ -DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
+ -DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
+ -DModule_vtkIOFFMPEG="$(usex ffmpeg)"
+
+ -DVTK_Group_Tk="$(usex tk)"
+ -DVTK_USE_TK="$(usex tk)"
+ -DModule_vtkRenderingTk="$(usex tk)"
+ -DModule_vtkTclTk="$(usex tcl)"
+ -DModule_vtkWrappingTcl="$(usex tcl)"
+ -DBUILD_TESTING="$(usex test)"
+ )
+
+ if use openmp; then
+ mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
+ fi
+
+ # TODO: MantaView VaporPlugin VRPlugin
+ mycmakeargs+=(
+ -DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
+ -DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
+ # these are always needed for plugins
+ -DModule_vtkFiltersFlowPaths="$(usex plugins)"
+ -DModule_vtkPVServerManagerApplication="$(usex plugins)"
+ )
+
+ cmake-utils_src_configure
+}
+
+src_compile() {
+ cmake-utils_src_compile
+}
+
+src_install() {
+ cmake-utils_src_install
+
+ # remove wrapper binaries and put the actual executable in place
+ for i in "${ED}"/usr/bin/*; do
+ mv "${ED}"/usr/lib/"$(basename $i)" "$i" || die
+ done
+
+ # install libraries into correct directory respecting get_libdir:
+ mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
+ mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
+ mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
+ rmdir "${ED}"/usr/lib_tmp || die
+
+ # set up the environment
+ echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
+ doenvd "${T}"/40${PN}
+
+ newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+ make_desktop_entry paraview "Paraview" paraview
+
+ use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}
diff --git a/sys-cluster/openmpi/Manifest b/sys-cluster/openmpi/Manifest
index 5312125db61..7faa634d496 100644
--- a/sys-cluster/openmpi/Manifest
+++ b/sys-cluster/openmpi/Manifest
@@ -11,3 +11,4 @@ DIST openmpi-2.0.4.tar.bz2 8272983 BLAKE2B
7d0a392fbc8c896cdccefb9bf0ff83fbd8db8
DIST openmpi-2.1.3.tar.bz2 8311304 BLAKE2B
a6a2d0d759a7207e4e9e9bb1526825ce5b0c9acd22c113f71712381fd7cab55228e78294533a5af6ef2b243803d789c5c71c6d59dd7a8ebbf10b2aa5d99296fd
SHA512
61ecf53d840feb4cad1e792225c7fb07a8c4cb849f21693051359cde2cf1b5060de3a9d00ba3b55ded20b5b93bc5ac439951b4fe5cb1a74d4e800f26c979feba
DIST openmpi-3.0.0.tar.bz2 9267606 BLAKE2B
9ee569a9c5f5918bb3d389a2945a2e7a5d98464afbd111eb2426a4e8296a23cf6d5b558554ce8126b13f910bd59acbb77e93ac297f3cf222c4bc764836b39ee6
SHA512
7e37eacf959a803d6d89dff4291b64a1f3d83bc7941b778a2fb13d12be0f205cb904e4a807d79676ad1e31fd99ffb15f255c8a227e830673455abb144f14616a
DIST openmpi-3.0.1.tar.bz2 9176460 BLAKE2B
65fdaeb492da3cf86a68c2d47d19568c8d65e92d0202041853ae3cbe0f057d8bdc79953538921b5b8c9eb9c9cedab8502816985e12524704992069a51e08d857
SHA512
15fad504ba743d564e7196b62a112027798d4b26e9c8d11d9c1c00ac2968f1858ebc168df30473104c5a31f71e38ab558204b598260b535a12b6094aa77182b8
+DIST openmpi-3.1.0.tar.bz2 9443759 BLAKE2B
7670b2cec327bad1bf348e08def3d39ea0b971c9534ec3e462a56719c4a1ebc8ceaf4a76556d0213cc2b7610c26f849d881f84ceaaaf54645ffbcefbd0273663
SHA512
23a43a16683c4b56f96c711fe009d992f3bd4e10cf9ef55091865a5b1aed195cc1de6a87720564f70d3b60a2441966bab39cda8969293aeb118cda10aead3dee
