commit: 2ad8d135f344e32e7f1627bb293b776b36db9b80
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Jan 31 17:16:00 2017 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Jan 31 17:16:00 2017 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=2ad8d135
sci-biology/repeatmasker: respect EPREFIX
Package-Manager: Portage-2.3.3, Repoman-2.3.1
sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild | 16 ++++++++--------
1 file changed, 8 insertions(+), 8 deletions(-)
diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
index e0ad294..221c562 100644
--- a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
+++ b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
@@ -49,20 +49,20 @@ src_configure() {
echo "
env
\"${S}\"
-/opt/bin
+"${EPREFIX}"/opt/bin
1
-/usr/bin
+"${EPREFIX}"/usr/bin
Y
2
-/usr/bin
+"${EPREFIX}"/usr/bin
Y
4
-/usr/bin
+"${EPREFIX}"/usr/bin
Y
5" | "${S}/configure" || die "configure failed"
- sed -i -e 's|use lib $FindBin::RealBin;|use lib
"/usr/share/'${PN}'/lib";|' \
- -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/Libraries/\1"|' \
- -e '/$REPEATMASKER_DIR/
s|$FindBin::RealBin|/usr/share/'${PN}'|' \
+ sed -i -e "s|use lib $FindBin::RealBin;|use lib
${EPREFIX}/usr/share/${PN}/lib;|" \
+ -e
"s|.*\(taxonomy.dat\)|${EPREFIX}/usr/share/${PN}/Libraries/\1|" \
+ -e "/$REPEATMASKER_DIR/
s|$FindBin::RealBin|${EPREFIX}/usr/share/${PN}|" \
"${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm}
|| die
}
# configure failed to 'cp RepeatMaskerConfig.tmpl RepeatMaskerConfig.pm'
@@ -97,7 +97,7 @@ pkg_postinst(){
einfo "from Dfam-1.0 database www.dfam.org"
einfo "You can configure which search search engine is to be used and"
einfo "PATHs to the search binaries are defined in"
- einfo "/usr/share/${PN}/lib/RepeatMaskerConfig.pm"
+ einfo "${EPREFIX}/usr/share/${PN}/lib/RepeatMaskerConfig.pm"
einfo "Supported search engines are:"
optfeature "cross_match" sci-biology/phrap
optfeature "rmblast" sci-biology/rmblast
