commit: ac85f06620366c1e817dfcf8d7a90055f08eef47
Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org>
AuthorDate: Fri Dec 30 23:58:20 2016 +0000
Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org>
CommitDate: Mon Jan 2 16:13:44 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ac85f066
sci-libs/sundials: initial import
Package-Manager: Portage-2.3.3, Repoman-2.3.1
sci-libs/sundials/Manifest | 1 +
.../files/sundials-2.7.0-underlinking-libdir.patch | 395 +++++++++++++++++++++
sci-libs/sundials/metadata.xml | 22 ++
sci-libs/sundials/sundials-2.7.0.ebuild | 74 ++++
4 files changed, 492 insertions(+)
diff --git a/sci-libs/sundials/Manifest b/sci-libs/sundials/Manifest
new file mode 100644
index 00000000..53a6a98
--- /dev/null
+++ b/sci-libs/sundials/Manifest
@@ -0,0 +1 @@
+DIST sundials-2.7.0.tar.gz 12258093 SHA256
d39fcac7175d701398e4eb209f7e92a5b30a78358d4a0c0fcc23db23c11ba104 SHA512
c86c167538065a4109b36ae7c8f60f3d92184133cfa661b5acfccee052c38f40be865412a1746bb57907b61602c212c0f15e1e30ef29e8a49db6d46a75a28e69
WHIRLPOOL
3aabd2912e6be7d159d69853ecc76d9549cc6020344083c71cdcf43867e86d95d14862463c201270f9ff5a16536f4341d6e0eb466402870cf7ee6e7a45669667
diff --git a/sci-libs/sundials/files/sundials-2.7.0-underlinking-libdir.patch
b/sci-libs/sundials/files/sundials-2.7.0-underlinking-libdir.patch
new file mode 100644
index 00000000..db47ac3
--- /dev/null
+++ b/sci-libs/sundials/files/sundials-2.7.0-underlinking-libdir.patch
@@ -0,0 +1,395 @@
+diff -Nur sundials-2.7.0.orig/src/arkode/CMakeLists.txt
sundials-2.7.0/src/arkode/CMakeLists.txt
+--- sundials-2.7.0.orig/src/arkode/CMakeLists.txt 2016-09-26
22:16:52.000000000 +0000
++++ sundials-2.7.0/src/arkode/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -127,7 +127,7 @@
+ PROPERTIES OUTPUT_NAME sundials_arkode CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the ARKODE library
+- INSTALL(TARGETS sundials_arkode_static DESTINATION lib)
++ INSTALL(TARGETS sundials_arkode_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -146,8 +146,10 @@
+ SET_TARGET_PROPERTIES(sundials_arkode_shared
+ PROPERTIES VERSION ${arkodelib_VERSION} SOVERSION ${arkodelib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_arkode_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
++
+ # Install the ARKODE library
+- INSTALL(TARGETS sundials_arkode_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_arkode_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/arkode/fcmix/CMakeLists.txt
sundials-2.7.0/src/arkode/fcmix/CMakeLists.txt
+--- sundials-2.7.0.orig/src/arkode/fcmix/CMakeLists.txt 2016-09-26
22:16:52.000000000 +0000
++++ sundials-2.7.0/src/arkode/fcmix/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -70,7 +70,7 @@
+ PROPERTIES OUTPUT_NAME sundials_farkode CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the FARKODE library
+-INSTALL(TARGETS sundials_farkode_static DESTINATION lib)
++INSTALL(TARGETS sundials_farkode_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ #
+ MESSAGE(STATUS "Added ARKODE FCMIX module")
+diff -Nur sundials-2.7.0.orig/src/cvode/CMakeLists.txt
sundials-2.7.0/src/cvode/CMakeLists.txt
+--- sundials-2.7.0.orig/src/cvode/CMakeLists.txt 2016-09-26
22:17:07.000000000 +0000
++++ sundials-2.7.0/src/cvode/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -134,7 +134,7 @@
+ PROPERTIES OUTPUT_NAME sundials_cvode CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the CVODE library
+- INSTALL(TARGETS sundials_cvode_static DESTINATION lib)
++ INSTALL(TARGETS sundials_cvode_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -153,8 +153,10 @@
+ SET_TARGET_PROPERTIES(sundials_cvode_shared
+ PROPERTIES VERSION ${cvodelib_VERSION} SOVERSION ${cvodelib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_cvode_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
++
+ # Install the CVODE library
+- INSTALL(TARGETS sundials_cvode_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_cvode_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/cvode/fcmix/CMakeLists.txt
sundials-2.7.0/src/cvode/fcmix/CMakeLists.txt
+--- sundials-2.7.0.orig/src/cvode/fcmix/CMakeLists.txt 2016-09-26
22:17:07.000000000 +0000
++++ sundials-2.7.0/src/cvode/fcmix/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -57,7 +57,7 @@
+ PROPERTIES OUTPUT_NAME sundials_fcvode CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the FCVODE library
+-INSTALL(TARGETS sundials_fcvode_static DESTINATION lib)
++INSTALL(TARGETS sundials_fcvode_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ #
+ MESSAGE(STATUS "Added CVODE FCMIX module")
+diff -Nur sundials-2.7.0.orig/src/cvodes/CMakeLists.txt
sundials-2.7.0/src/cvodes/CMakeLists.txt
+--- sundials-2.7.0.orig/src/cvodes/CMakeLists.txt 2016-09-26
22:17:15.000000000 +0000
++++ sundials-2.7.0/src/cvodes/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -121,7 +121,7 @@
+ PROPERTIES OUTPUT_NAME sundials_cvodes CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the CVODES library
+- INSTALL(TARGETS sundials_cvodes_static DESTINATION lib)
++ INSTALL(TARGETS sundials_cvodes_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -140,8 +140,9 @@
+ SET_TARGET_PROPERTIES(sundials_cvodes_shared
+ PROPERTIES VERSION ${cvodeslib_VERSION} SOVERSION ${cvodeslib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_cvodes_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
+ # Install the CVODES library
+- INSTALL(TARGETS sundials_cvodes_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_cvodes_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/ida/CMakeLists.txt
sundials-2.7.0/src/ida/CMakeLists.txt
+--- sundials-2.7.0.orig/src/ida/CMakeLists.txt 2016-09-26 22:17:26.000000000
+0000
++++ sundials-2.7.0/src/ida/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -124,7 +124,7 @@
+ PROPERTIES OUTPUT_NAME sundials_ida CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the IDA library
+- INSTALL(TARGETS sundials_ida_static DESTINATION lib)
++ INSTALL(TARGETS sundials_ida_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -143,8 +143,10 @@
+ SET_TARGET_PROPERTIES(sundials_ida_shared
+ PROPERTIES VERSION ${idalib_VERSION} SOVERSION ${idalib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_ida_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
++
+ # Install the IDA library
+- INSTALL(TARGETS sundials_ida_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_ida_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/ida/fcmix/CMakeLists.txt
sundials-2.7.0/src/ida/fcmix/CMakeLists.txt
+--- sundials-2.7.0.orig/src/ida/fcmix/CMakeLists.txt 2016-09-26
22:17:26.000000000 +0000
++++ sundials-2.7.0/src/ida/fcmix/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -56,6 +56,6 @@
+ PROPERTIES OUTPUT_NAME sundials_fida CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the FIDA library
+-INSTALL(TARGETS sundials_fida_static DESTINATION lib)
++INSTALL(TARGETS sundials_fida_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+ #
+ MESSAGE(STATUS "Added IDA FCMIX module")
+diff -Nur sundials-2.7.0.orig/src/idas/CMakeLists.txt
sundials-2.7.0/src/idas/CMakeLists.txt
+--- sundials-2.7.0.orig/src/idas/CMakeLists.txt 2016-09-26
22:17:32.000000000 +0000
++++ sundials-2.7.0/src/idas/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -126,7 +126,7 @@
+ PROPERTIES OUTPUT_NAME sundials_idas CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the IDA library
+- INSTALL(TARGETS sundials_idas_static DESTINATION lib)
++ INSTALL(TARGETS sundials_idas_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -145,8 +145,10 @@
+ SET_TARGET_PROPERTIES(sundials_idas_shared
+ PROPERTIES VERSION ${idaslib_VERSION} SOVERSION ${idaslib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_idas_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
++
+ # Install the IDAS library
+- INSTALL(TARGETS sundials_idas_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_idas_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/kinsol/CMakeLists.txt
sundials-2.7.0/src/kinsol/CMakeLists.txt
+--- sundials-2.7.0.orig/src/kinsol/CMakeLists.txt 2016-09-26
22:17:39.000000000 +0000
++++ sundials-2.7.0/src/kinsol/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -134,7 +134,7 @@
+ PROPERTIES OUTPUT_NAME sundials_kinsol CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the KINSOL library
+- INSTALL(TARGETS sundials_kinsol_static DESTINATION lib)
++ INSTALL(TARGETS sundials_kinsol_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_STATIC_LIBS)
+
+@@ -153,8 +153,10 @@
+ SET_TARGET_PROPERTIES(sundials_kinsol_shared
+ PROPERTIES VERSION ${kinsollib_VERSION} SOVERSION ${kinsollib_SOVERSION})
+
++ TARGET_LINK_LIBRARIES(sundials_kinsol_shared -lm ${KLU_LIBRARIES}
${SUPERLUMT_LIBRARIES} ${LAPACK_LIBRARIES})
++
+ # Install the KINSOL library
+- INSTALL(TARGETS sundials_kinsol_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_kinsol_shared DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ ENDIF(BUILD_SHARED_LIBS)
+
+diff -Nur sundials-2.7.0.orig/src/kinsol/fcmix/CMakeLists.txt
sundials-2.7.0/src/kinsol/fcmix/CMakeLists.txt
+--- sundials-2.7.0.orig/src/kinsol/fcmix/CMakeLists.txt 2016-09-26
22:17:39.000000000 +0000
++++ sundials-2.7.0/src/kinsol/fcmix/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -54,7 +54,7 @@
+ PROPERTIES OUTPUT_NAME sundials_fkinsol CLEAN_DIRECT_OUTPUT 1)
+
+ # Install the FKINSOL library
+-INSTALL(TARGETS sundials_fkinsol_static DESTINATION lib)
++INSTALL(TARGETS sundials_fkinsol_static DESTINATION ${CMAKE_INSTALL_LIBDIR})
+
+ #
+ MESSAGE(STATUS "Added KINSOL FCMIX module")
+diff -Nur sundials-2.7.0.orig/src/nvec_openmp/CMakeLists.txt
sundials-2.7.0/src/nvec_openmp/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_openmp/CMakeLists.txt 2016-09-26
22:16:50.000000000 +0000
++++ sundials-2.7.0/src/nvec_openmp/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -51,7 +51,7 @@
+ ADD_LIBRARY(sundials_nvecopenmp_static STATIC ${nvecopenmp_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecopenmp_static
+ PROPERTIES OUTPUT_NAME sundials_nvecopenmp CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecopenmp_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecopenmp_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -65,7 +65,8 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecopenmp CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecopenmp_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecopenmp_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_nvecopenmp_shared -lm)
++ INSTALL(TARGETS sundials_nvecopenmp_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECOPENMP header files
+@@ -78,7 +79,7 @@
+ ADD_LIBRARY(sundials_fnvecopenmp_static STATIC ${fnvecopenmp_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_fnvecopenmp_static
+ PROPERTIES OUTPUT_NAME sundials_fnvecopenmp CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_fnvecopenmp_static DESTINATION lib)
++ INSTALL(TARGETS sundials_fnvecopenmp_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+ IF(BUILD_SHARED_LIBS)
+ ADD_LIBRARY(sundials_fnvecopenmp_shared ${fnvecopenmp_SOURCES})
+@@ -86,7 +87,8 @@
+ PROPERTIES OUTPUT_NAME sundials_fnvecopenmp CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_fnvecopenmp_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_fnvecopenmp_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_fnvecopenmp_shared -lm)
++ INSTALL(TARGETS sundials_fnvecopenmp_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+ ENDIF(FCMIX_ENABLE AND F77_FOUND)
+
+diff -Nur sundials-2.7.0.orig/src/nvec_par/CMakeLists.txt
sundials-2.7.0/src/nvec_par/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_par/CMakeLists.txt 2016-09-26
22:16:50.000000000 +0000
++++ sundials-2.7.0/src/nvec_par/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -52,7 +52,7 @@
+ ADD_LIBRARY(sundials_nvecparallel_static STATIC ${nvecparallel_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecparallel_static
+ PROPERTIES OUTPUT_NAME sundials_nvecparallel CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecparallel_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecparallel_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -66,7 +66,8 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecparallel CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecparallel_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecparallel_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_nvecparallel_shared -lm)
++ INSTALL(TARGETS sundials_nvecparallel_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECPARALLEL header files
+@@ -79,7 +80,7 @@
+ ADD_LIBRARY(sundials_fnvecparallel_static STATIC ${fnvecparallel_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_fnvecparallel_static
+ PROPERTIES OUTPUT_NAME sundials_fnvecparallel CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_fnvecparallel_static DESTINATION lib)
++ INSTALL(TARGETS sundials_fnvecparallel_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+ IF(BUILD_SHARED_LIBS)
+ ADD_LIBRARY(sundials_fnvecparallel_shared SHARED ${fnvecparallel_SOURCES})
+@@ -87,7 +88,7 @@
+ PROPERTIES OUTPUT_NAME sundials_fnvecparallel CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_fnvecparallel_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_fnvecparallel_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_fnvecparallel_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+ ENDIF(FCMIX_ENABLE AND MPIF_FOUND)
+ #
+diff -Nur sundials-2.7.0.orig/src/nvec_parhyp/CMakeLists.txt
sundials-2.7.0/src/nvec_parhyp/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_parhyp/CMakeLists.txt 2016-09-26
22:16:50.000000000 +0000
++++ sundials-2.7.0/src/nvec_parhyp/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -53,7 +53,7 @@
+ ADD_LIBRARY(sundials_nvecparhyp_static STATIC ${nvecparhyp_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecparhyp_static
+ PROPERTIES OUTPUT_NAME sundials_nvecparhyp CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecparhyp_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecparhyp_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -67,7 +67,7 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecparhyp CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecparhyp_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecparhyp_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecparhyp_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECPARHYP header files
+diff -Nur sundials-2.7.0.orig/src/nvec_petsc/CMakeLists.txt
sundials-2.7.0/src/nvec_petsc/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_petsc/CMakeLists.txt 2016-09-26
22:16:50.000000000 +0000
++++ sundials-2.7.0/src/nvec_petsc/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -53,7 +53,7 @@
+ ADD_LIBRARY(sundials_nvecpetsc_static STATIC ${nvecpetsc_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecpetsc_static
+ PROPERTIES OUTPUT_NAME sundials_nvecpetsc CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecpetsc_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecpetsc_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -67,7 +67,7 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecpetsc CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecpetsc_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecpetsc_shared DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecpetsc_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECPARHYP header files
+diff -Nur sundials-2.7.0.orig/src/nvec_pthreads/CMakeLists.txt
sundials-2.7.0/src/nvec_pthreads/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_pthreads/CMakeLists.txt 2016-09-26
22:16:50.000000000 +0000
++++ sundials-2.7.0/src/nvec_pthreads/CMakeLists.txt 2016-12-30
23:41:54.355840949 +0000
+@@ -44,7 +44,7 @@
+ ADD_LIBRARY(sundials_nvecpthreads_static STATIC ${nvecpthreads_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecpthreads_static
+ PROPERTIES OUTPUT_NAME sundials_nvecpthreads CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecpthreads_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecpthreads_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -58,7 +58,8 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecpthreads CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecpthreads_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_nvecpthreads_shared -lm -lpthread)
++ INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECPTHREADS header files
+@@ -71,7 +72,7 @@
+ ADD_LIBRARY(sundials_fnvecpthreads_static STATIC ${fnvecpthreads_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_fnvecpthreads_static
+ PROPERTIES OUTPUT_NAME sundials_fnvecpthreads CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_fnvecpthreads_static DESTINATION lib)
++ INSTALL(TARGETS sundials_fnvecpthreads_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+ IF(BUILD_SHARED_LIBS)
+ ADD_LIBRARY(sundials_fnvecpthreads_shared ${fnvecpthreads_SOURCES})
+@@ -79,7 +80,8 @@
+ PROPERTIES OUTPUT_NAME sundials_fnvecpthreads CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_fnvecpthreads_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_fnvecpthreads_shared -lm -lpthread)
++ INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+ ENDIF(FCMIX_ENABLE AND F77_FOUND)
+
+diff -Nur sundials-2.7.0.orig/src/nvec_ser/CMakeLists.txt
sundials-2.7.0/src/nvec_ser/CMakeLists.txt
+--- sundials-2.7.0.orig/src/nvec_ser/CMakeLists.txt 2016-09-26
22:16:49.000000000 +0000
++++ sundials-2.7.0/src/nvec_ser/CMakeLists.txt 2016-12-30 23:41:54.355840949
+0000
+@@ -44,7 +44,7 @@
+ ADD_LIBRARY(sundials_nvecserial_static STATIC ${nvecserial_SOURCES}
${shared_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_nvecserial_static
+ PROPERTIES OUTPUT_NAME sundials_nvecserial CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_nvecserial_static DESTINATION lib)
++ INSTALL(TARGETS sundials_nvecserial_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+
+ # Rules for building and installing the shared library:
+@@ -58,7 +58,8 @@
+ PROPERTIES OUTPUT_NAME sundials_nvecserial CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_nvecserial_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_nvecserial_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_nvecserial_shared -lm)
++ INSTALL(TARGETS sundials_nvecserial_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+
+ # Install the NVECSERIAL header files
+@@ -71,7 +72,7 @@
+ ADD_LIBRARY(sundials_fnvecserial_static STATIC ${fnvecserial_SOURCES})
+ SET_TARGET_PROPERTIES(sundials_fnvecserial_static
+ PROPERTIES OUTPUT_NAME sundials_fnvecserial CLEAN_DIRECT_OUTPUT 1)
+- INSTALL(TARGETS sundials_fnvecserial_static DESTINATION lib)
++ INSTALL(TARGETS sundials_fnvecserial_static DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_STATIC_LIBS)
+ IF(BUILD_SHARED_LIBS)
+ ADD_LIBRARY(sundials_fnvecserial_shared ${fnvecserial_SOURCES})
+@@ -79,7 +80,8 @@
+ PROPERTIES OUTPUT_NAME sundials_fnvecserial CLEAN_DIRECT_OUTPUT 1)
+ SET_TARGET_PROPERTIES(sundials_fnvecserial_shared
+ PROPERTIES VERSION ${nveclib_VERSION} SOVERSION ${nveclib_SOVERSION})
+- INSTALL(TARGETS sundials_fnvecserial_shared DESTINATION lib)
++ TARGET_LINK_LIBRARIES(sundials_fnvecserial_shared -lm)
++ INSTALL(TARGETS sundials_fnvecserial_shared DESTINATION
${CMAKE_INSTALL_LIBDIR})
+ ENDIF(BUILD_SHARED_LIBS)
+ ENDIF(FCMIX_ENABLE AND F77_FOUND)
+
diff --git a/sci-libs/sundials/metadata.xml b/sci-libs/sundials/metadata.xml
new file mode 100644
index 00000000..b4735cc
--- /dev/null
+++ b/sci-libs/sundials/metadata.xml
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
+<pkgmetadata>
+ <maintainer type="project">
+ <email>[email protected]</email>
+ <name>Gentoo Scientific Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ SUite of Nonlinear and DIfferential/ALgebraic equation Solvers was
+ implemented with the goal of providing robust time integrators and
+ nonlinear solvers that can easily be incorporated into existing
+ simulation codes. The primary design goals were to require minimal
+ information from the user, allow users to easily supply their own
+ data structures underneath the solvers, and allow for easy
+ incorporation of user-supplied linear solvers and preconditioners.
+ </longdescription>
+ <use>
+ <flag name="hypre">Build with <pkg>sci-libs/hypre</pkg> conditioners</flag>
+ <flag name="sparse">Enable support for <pkg>sci-libs/klu</pkg> sparse
solver</flag>
+ <flag name="superlumt">Build with <pkg>sci-libs/superlu_mt</pkg></flag>
+ </use>
+</pkgmetadata>
diff --git a/sci-libs/sundials/sundials-2.7.0.ebuild
b/sci-libs/sundials/sundials-2.7.0.ebuild
new file mode 100644
index 00000000..d42c789
--- /dev/null
+++ b/sci-libs/sundials/sundials-2.7.0.ebuild
@@ -0,0 +1,74 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+FORTRAN_NEEDED=fortran
+FORTRAN_STANDARD=90
+
+inherit cmake-utils toolchain-funcs fortran-2 versionator
+
+DESCRIPTION="Suite of nonlinear solvers"
+HOMEPAGE="http://computation.llnl.gov/projects/sundials";
+SRC_URI="http://computation.llnl.gov/projects/sundials/download/${P}.tar.gz";
+
+LICENSE="BSD"
+SLOT="0/$(get_major_version)"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="cxx doc examples fortran hypre lapack mpi openmp sparse static-libs
superlumt threads"
+REQUIRED_USE="hypre? ( mpi )"
+
+RDEPEND="
+ lapack? ( virtual/lapack )
+ mpi? ( virtual/mpi sci-libs/hypre:= )
+ sparse? ( sci-libs/klu:= )
+ superlumt? ( sci-libs/superlu_mt:= )
+"
+DEPEND="${RDEPEND}
+ virtual/pkgconfig"
+
+PATCHES=( "${FILESDIR}"/${P}-underlinking-libdir.patch )
+
+pkg_setup() {
+ if [[ ${MERGE_TYPE} != binary ]] && use openmp && [[ $(tc-getCC) ==
*gcc ]] && ! tc-has-openmp; then
+ ewarn "OpenMP is not available in your current selected gcc"
+ die "need openmp capable gcc"
+ fi
+}
+
+src_configure() {
+ mycmakeargs+=(
+ -DBUILD_SHARED_LIBS=ON
+ -DBUILD_STATIC_LIBS="$(usex static-libs)"
+ -DCXX_ENABLE="$(usex cxx)"
+ -DFCMIX_ENABLE="$(usex fortran)"
+ -DF90_ENABLE="$(usex fortran)"
+ -DHYPRE_ENABLE="$(usex hypre)"
+ -DHYPRE_INCLUDE_DIR="${EPREFIX}/usr/include/hypre"
+ -DHYPRE_LIBRARY="HYPRE"
+ -DKLU_ENABLE="$(usex sparse)"
+ -DKLU_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libklu.so"
+ -DLAPACK_ENABLE="$(usex lapack)"
+ -DMPI_ENABLE="$(usex mpi)"
+ -DOPENMP_ENABLE="$(usex openmp)"
+ -DPTHREAD_ENABLE="$(usex threads)"
+ -DSUPERLUMT_ENABLE="$(usex superlumt)"
+ -DSUPERLUMT_INCLUDE_DIR="${EPREFIX}/usr/include/superlu_mt"
+ -DSUPERLUMT_LIBRARY="superlu_mt"
+ -DEXAMPLES_ENABLE="$(usex examples)"
+ -DEXAMPLES_INSTALL=ON
+ -DEXAMPLES_INSTALL_PATH="/usr/share/doc/${PF}/examples"
+ -DUSE_GENERIC_MATH=ON
+ )
+ cmake-utils_src_configure
+}
+
+src_install() {
+ cmake-utils_src_install
+ use doc && dodoc doc/*/*.pdf
+ cd src
+ for r in */README; do
+ newdoc ${r} README-${r%/*}
+ done
+}
