commit: a300ee7a49ca26ba081d397ca413625dd4df4656
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Oct 29 11:04:39 2016 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Oct 29 11:10:59 2016 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a300ee7a
sci-biology/rebase: Bump to latest DB
Package-Manager: portage-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-biology/rebase/Manifest | 1 +
sci-biology/rebase/rebase-1611.ebuild | 46 +++++++++++++++++++++++++++++++++++
2 files changed, 47 insertions(+)
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index a41476f..c89b185 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -3,3 +3,4 @@ DIST rebase-1604.tar.xz 102817536 SHA256
f234eadba5aa30573d664c9d9caab480ecbb383
DIST rebase-1607.tar.xz 111124484 SHA256
2d795db3cc8cf7ff22eda983334e480b9c7b61c5b5ed9d38e2d626489fc4cefe SHA512
b166f75d6d82efe68f9e2521e26c7dc1bf34dde168d6eb94195f2f938316b0c7d06a11684de7d71e9bef2f3051a12c848c87a0d48bb6e148f6f84e9f694ced48
WHIRLPOOL
823054e6b366b707ba1be105fd6172f315358ba07ac8cfb7bbafdac3b9f14718e3406bb4b1c048b18dc8422ead4da09512b61758470bd5ca6a8d9141ebb5c578
DIST rebase-1608.tar.xz 113417576 SHA256
ce8872adbe09c756af4bded43bde43e45d82b14642454fad05da8deef271bb81 SHA512
989d353cb9d73039d6c08805c4d32dbef1bdd37683f4c2ead5fa4889eae05bf3bdba54214d199b87961d8ace4d950f21dbc749e955867f8c6ccac766c7a06520
WHIRLPOOL
bc89aa9230680ac08d3c17f7068bb45cb28dbf45038ffda5c2b4660fe366cdc32376ca32439953a2faa7524c6a5c4811a124288b85cf8320ef324458e3957d70
DIST rebase-1609.tar.xz 140865364 SHA256
0799f4a1dae79eaea6629425f6dae104951b94777dc58866adceb4277c577f51 SHA512
3a06a67c7df78f3eb6214dece1f2045ce2610cf34efc8f9eb34b97ca2aa818ea9b52124da1b44895a5a53ec45b19bb78f0cc036b2053e28f1cb72087cd42ad35
WHIRLPOOL
fcd5ff5674465cab269dbe8c4f7e5c2c33f6b3b2a515e3f1c1a8c8b60fc68ecca1f48ea4c363ce52b77ddfd50e8fc9c22aad69b7ebc190ccdcfcd2b52d3bc27b
+DIST rebase-1611.tar.xz 117976252 SHA256
fcfe506c8f018b8d7b43c5f87e4125310e43d2d2ea5f3ea6b3523f9d23ae7d1c SHA512
33287d497e399a7cfb8e7dc6e2b905553303b4b8dce49066eafc3f48cac47e9e3fd8c8736a7a0352ed5fd5da39aca220ed59884f887a5588cedc2d5e56b6e764
WHIRLPOOL
52758d6017e0725bd2f84cb2cd4f16b3965a21f45a664ed71078d50b95a64664239936a605052bc3b34ef67e70cb96fd5b1e2005bdc699be9cff9f919b197734
diff --git a/sci-biology/rebase/rebase-1611.ebuild
b/sci-biology/rebase/rebase-1611.ebuild
new file mode 100644
index 00000000..47f2e43
--- /dev/null
+++ b/sci-biology/rebase/rebase-1611.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com";
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz";
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris
~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+ if use emboss; then
+ echo; einfo "Indexing Rebase for usage with EMBOSS."
+ mkdir REBASE || die
+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+ -protofile proto.${MY_PV} -equivalences \
+ || die "Indexing Rebase failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${MY_PV} proto.${MY_PV}
+ fi
+ newdoc REBASE.DOC README
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/embossre.{enz,ref,sup}
+ insinto /usr/share/EMBOSS/data
+ doins REBASE/embossre.equ
+ fi
+}
