commit: ba16a0589e5a8575f816f2bd6844d56e50cf7513 Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org> AuthorDate: Wed Jul 20 19:34:44 2016 +0000 Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org> CommitDate: Wed Jul 20 19:37:37 2016 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ba16a058
sci-physics/hoomd-blue: version bump Package-Manager: portage-2.2.28 .../hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch | 53 ++++++++++++++++++++ sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild | 57 ++++++++++++++++++++++ 2 files changed, 110 insertions(+) diff --git a/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch b/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch new file mode 100644 index 0000000..523c4f6 --- /dev/null +++ b/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch @@ -0,0 +1,53 @@ +From 7dce8d65ad8069c6a7fdb89ebea13f55d2db8182 Mon Sep 17 00:00:00 2001 +From: "Joshua A. Anderson" <[email protected]> +Date: Wed, 20 Jul 2016 14:44:07 -0400 +Subject: [PATCH] Always add -std=c++11 to CXX_FLAGS + +refs #173 +--- + CMake/hoomd/HOOMDCFlagsSetup.cmake | 18 ++++++++++-------- + 1 file changed, 10 insertions(+), 8 deletions(-) + +diff --git a/CMake/hoomd/HOOMDCFlagsSetup.cmake b/CMake/hoomd/HOOMDCFlagsSetup.cmake +index 2655913..db503b3 100644 +--- a/CMake/hoomd/HOOMDCFlagsSetup.cmake ++++ b/CMake/hoomd/HOOMDCFlagsSetup.cmake +@@ -32,10 +32,10 @@ if(NOT PASSED_FIRST_CONFIGURE) + set(CMAKE_C_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during release builds." FORCE) + set(CMAKE_C_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) + +- set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the compiler during debug builds." FORCE) +- set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall -Wno-unknown-pragmas -DNDEBUG -std=c++11" CACHE STRING "Flags used by the compiler during minimum size release builds." FORCE) +- set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the compiler during release builds." FORCE) +- set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) ++ set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during debug builds." FORCE) ++ set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall -Wno-unknown-pragmas -DNDEBUG" CACHE STRING "Flags used by the compiler during minimum size release builds." FORCE) ++ set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during release builds." FORCE) ++ set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 -funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) + + elseif(CMAKE_CXX_COMPILER MATCHES "icpc") + # default flags for intel +@@ -44,10 +44,10 @@ if(NOT PASSED_FIRST_CONFIGURE) + set(CMAKE_C_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags used by the compiler during release builds." FORCE) + set(CMAKE_C_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) + +- set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g -std=c++11" CACHE STRING "Flags used by the compiler during debug builds." FORCE) +- set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG -std=c++11" CACHE STRING "Flags used by the compiler during minimum size release builds." FORCE) +- set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG -std=c++11" CACHE STRING "Flags used by the compiler during release builds." FORCE) +- set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG -std=c++11" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) ++ set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g" CACHE STRING "Flags used by the compiler during debug builds." FORCE) ++ set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG" CACHE STRING "Flags used by the compiler during minimum size release builds." FORCE) ++ set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags used by the compiler during release builds." FORCE) ++ set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE STRING "Flags used by the compiler during release builds with debug info." FORCE) + + else(CMAKE_COMPILER_IS_GNUCXX) + message(STATUS "No default CXXFLAGS for your compiler, set them manually") +@@ -64,3 +64,5 @@ if(NOT PASSED_FIRST_CONFIGURE) + + SET(PASSED_FIRST_CONFIGURE ON CACHE INTERNAL "First configure has run: CXX_FLAGS have had their defaults changed" FORCE) + endif(NOT PASSED_FIRST_CONFIGURE) ++ ++set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11") +-- +2.7.3 + diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild new file mode 100644 index 0000000..963ddc3 --- /dev/null +++ b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild @@ -0,0 +1,57 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_3,3_4} ) +CMAKE_MAKEFILE_GENERATOR="ninja" + +inherit cmake-utils cuda flag-o-matic git-r3 python-single-r1 + +DESCRIPTION="a general-purpose particle simulation toolkit" +HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/"; +EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git"; + +if [[ ${PV} != 9999 ]]; then + KEYWORDS="~amd64" + EGIT_COMMIT="v${PV}" + PATCHES=( "${FILESDIR}/${P}-cxx11.patch" ) +fi + +LICENSE="hoomd-blue" +SLOT="0" +IUSE="cuda test mpi +zlib" + +REQUIRED_USE="${PYTHON_REQUIRED_USE}" + +RDEPEND="${PYTHON_DEPS} + mpi? ( virtual/mpi ) + cuda? ( dev-util/nvidia-cuda-sdk ) + zlib? ( sys-libs/zlib ) + dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]" +DEPEND="${RDEPEND}" + #doc? ( app-doc/doxygen )" + +src_prepare() { + use cuda && cuda_src_prepare + + cmake-utils_src_prepare +} + +src_configure() { + local mycmakeargs=( + -DENABLE_MPI=$(usex mpi) + -DENABLE_DOXYGEN=OFF #$( + -DENABLE_CUDA=$(usex cuda) + -DBUILD_TESTING=$(usex test) + -DPYTHON_EXECUTABLE="${PYTHON}" + -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir) + ) + cmake-utils_src_configure +} + +src_install() { + #use doc && HTML_DOCS=( "${BUILD_DIR}"/doc/hoomd-*doc* ) + cmake-utils_src_install +}
