commit: e48ef93babd11710d0e39fdea396cbd12f594968 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri Jul 15 13:13:31 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri Jul 15 13:13:31 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e48ef93b
sci-biology/stampy: new package; installs into wrong PYTHON library path Package-Manager: portage-2.2.28 sci-biology/stampy/metadata.xml | 12 ++++++++++++ sci-biology/stampy/stampy-1.0.28.ebuild | 30 ++++++++++++++++++++++++++++++ 2 files changed, 42 insertions(+) diff --git a/sci-biology/stampy/metadata.xml b/sci-biology/stampy/metadata.xml new file mode 100644 index 0000000..f68a1b6 --- /dev/null +++ b/sci-biology/stampy/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>[email protected]</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/stampy/stampy-1.0.28.ebuild b/sci-biology/stampy/stampy-1.0.28.ebuild new file mode 100644 index 0000000..c820e6a --- /dev/null +++ b/sci-biology/stampy/stampy-1.0.28.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +inherit toolchain-funcs + +DESCRIPTION="Map highly divergent short reads to a reference" +HOMEPAGE="http://www.well.ox.ac.uk/project-stampy"; +SRC_URI="${P}.tar.gz" + +LICENSE="stampy-academic" +SLOT="0" +KEYWORDS="" +IUSE="" + +RESTRICT="fetch" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_install(){ + dobin *.py + local dest=/usr/$(get_libdir) # FIXME: still not correct + insinto "${dest}" + doins maptools.so + fperms a+x ${dest}/maptools.so + dodoc README.txt +}
