commit: 12acccc65945ccccb9e06f6788ad8ab9dc63463f Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Wed Feb 10 16:28:35 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Feb 10 16:28:35 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=12acccc6
sci-biology/smalt: finally a package to build from sources Package-Manager: portage-2.2.26 sci-biology/smalt/metadata.xml | 12 ++++++++++++ sci-biology/smalt/smalt-0.7.6.ebuild | 29 +++++++++++++++++++++++++++++ 2 files changed, 41 insertions(+) diff --git a/sci-biology/smalt/metadata.xml b/sci-biology/smalt/metadata.xml new file mode 100644 index 0000000..1699e58 --- /dev/null +++ b/sci-biology/smalt/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +<maintainer type="project"> + <email>[email protected]</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/smalt/smalt-0.7.6.ebuild b/sci-biology/smalt/smalt-0.7.6.ebuild new file mode 100644 index 0000000..25d0104 --- /dev/null +++ b/sci-biology/smalt/smalt-0.7.6.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +MY_PN="${PN%-bin}" +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Successor of ssaha2: pairwise sequence alignment mapping DNA reads" +HOMEPAGE="http://www.sanger.ac.uk/resources/software/smalt/"; +SRC_URI="http://sourceforge.net/projects/${PN}/files/${P}.tar.gz"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="" +IUSE="" + +S="${WORKDIR}"/${MY_P} + +src_install(){ + dobin src/smalt + insinto /usr/share/"${PN}" + doins misc/*.py + dodoc README NEWS +} +# is the tarball with source code lacking the manual? +# dodoc NEWS ${MY_PN}_manual.pdf +# doman ${MY_PN}.1
