commit: 777a127a79fe0742dfc45a42b0480ab428885c92 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Tue Jan 5 09:46:14 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Tue Jan 5 09:46:14 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=777a127a
sci-biology/MuSeqBox: new package Package-Manager: portage-2.2.26 sci-biology/MuSeqBox/ChangeLog | 9 ++++++++ sci-biology/MuSeqBox/MuSeqBox-5.3.ebuild | 36 ++++++++++++++++++++++++++++++++ sci-biology/MuSeqBox/metadata.xml | 9 ++++++++ 3 files changed, 54 insertions(+) diff --git a/sci-biology/MuSeqBox/ChangeLog b/sci-biology/MuSeqBox/ChangeLog new file mode 100644 index 0000000..fc8e438 --- /dev/null +++ b/sci-biology/MuSeqBox/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/MuSeqBox +# Copyright 1999-2016 Gentoo Foundation; Distributed under the GPL v2 +# $Id$ + +*MuSeqBox-5.3 (05 Jan 2016) + + 05 Jan 2016; Martin Mokrejs <[email protected]> + +MuSeqBox-5.3.ebuild, +metadata.xml: + sci-biology/MuSeqBox: new package diff --git a/sci-biology/MuSeqBox/MuSeqBox-5.3.ebuild b/sci-biology/MuSeqBox/MuSeqBox-5.3.ebuild new file mode 100644 index 0000000..52aaafd --- /dev/null +++ b/sci-biology/MuSeqBox/MuSeqBox-5.3.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit toolchain-funcs + +DESCRIPTION="Parse and filter BLAST output into tab-delimited file" +HOMEPAGE="http://brendelgroup.org/bioinformatics2go/MuSeqBox.php"; +SRC_URI="http://www.brendelgroup.org/bioinformatics2go/Download/MuSeqBox-4-8-2015.tar.gz"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/MUSEQBOX5.4" + +src_compile(){ + cd src || die + $(tc-getCXX) ${CFLAGS} -DLINUX -c MuSeqBox.C || die + $(tc-getCXX) ${CFLAGS} ${LDFLAGS} -DLINUX MuSeqBox.o -o ../bin/MuSeqBox || die +} + +src_install(){ + dobin bin/* + dodoc 0README + insinto /usr/share/"${PN}" + doins doc/*.ps doc/*.pdf + doins -r data + doman doc/MuSeqBox.1 +} diff --git a/sci-biology/MuSeqBox/metadata.xml b/sci-biology/MuSeqBox/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/MuSeqBox/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
