jlec 14/04/24 11:38:57 Modified: profphd-1.0.39.ebuild ChangeLog Added: profphd-1.0.40.ebuild Log: sci-biology/profphd: Fix for newer perl, version Bump (Portage version: 2.2.10/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.4 sci-biology/profphd/profphd-1.0.39.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.4&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?rev=1.4&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild?r1=1.3&r2=1.4 Index: profphd-1.0.39.ebuild =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v retrieving revision 1.3 retrieving revision 1.4 diff -u -r1.3 -r1.4 --- profphd-1.0.39.ebuild 24 Apr 2013 14:28:05 -0000 1.3 +++ profphd-1.0.39.ebuild 24 Apr 2014 11:38:57 -0000 1.4 @@ -1,9 +1,11 @@ -# Copyright 1999-2013 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.3 2013/04/24 14:28:05 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.39.ebuild,v 1.4 2014/04/24 11:38:57 jlec Exp $ EAPI=5 +inherit eutils + DESCRIPTION="Secondary structure and solvent accessibility predictor" HOMEPAGE="https://rostlab.org/owiki/index.php/PROFphd_-_Secondary_Structure,_Solvent_Accessibility_and_Transmembrane_Helices_Prediction"; SRC_URI="ftp://rostlab.org/profphd/${P}.tar.xz"; @@ -24,6 +26,7 @@ sed \ -e '/ln -s/s:prof$:profphd:g' \ -i src/prof/Makefile || die + epatch "${FILESDIR}"/${P}-perl.patch } src_compile() { 1.4 sci-biology/profphd/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.4&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?rev=1.4&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/ChangeLog?r1=1.3&r2=1.4 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v retrieving revision 1.3 retrieving revision 1.4 diff -u -r1.3 -r1.4 --- ChangeLog 24 Apr 2013 14:28:05 -0000 1.3 +++ ChangeLog 24 Apr 2014 11:38:57 -0000 1.4 @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/profphd -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.3 2013/04/24 14:28:05 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/ChangeLog,v 1.4 2014/04/24 11:38:57 jlec Exp $ + +*profphd-1.0.40 (24 Apr 2014) + + 24 Apr 2014; Justin Lecher <[email protected]> profphd-1.0.39.ebuild, + +profphd-1.0.40.ebuild, +files/profphd-1.0.39-perl.patch: + Fix for newer perl, version Bump 24 Apr 2013; Justin Lecher <[email protected]> profphd-1.0.39.ebuild: Updated deps 1.1 sci-biology/profphd/profphd-1.0.40.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.40.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/profphd/profphd-1.0.40.ebuild?rev=1.1&content-type=text/plain Index: profphd-1.0.40.ebuild =================================================================== # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/profphd/profphd-1.0.40.ebuild,v 1.1 2014/04/24 11:38:57 jlec Exp $ EAPI=5 inherit eutils DESCRIPTION="Secondary structure and solvent accessibility predictor" HOMEPAGE="https://rostlab.org/owiki/index.php/PROFphd_-_Secondary_Structure,_Solvent_Accessibility_and_Transmembrane_Helices_Prediction"; SRC_URI="ftp://rostlab.org/profphd/${P}.tar.xz"; SLOT="0" LICENSE="GPL-2" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="" DEPEND="dev-lang/perl" RDEPEND="${DEPEND} dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profphd-utils " src_prepare() { sed \ -e '/ln -s/s:prof$:profphd:g' \ -i src/prof/Makefile || die epatch "${FILESDIR}"/${PN}-1.0.39-perl.patch } src_compile() { emake prefix="${EPREFIX}/usr" } src_install() { emake prefix="${EPREFIX}/usr" DESTDIR="${D}" install }
