commit: caf6cafd3614ade1e427bb619a9c7cd61faee579
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue May 26 09:25:38 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue May 26 09:25:38 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=caf6cafd
sci-biology/argo-bin: ebuild cleanup; version bump
Package-Manager: portage-2.2.18
sci-biology/argo-bin/ChangeLog | 6 ++++++
sci-biology/argo-bin/argo-bin-1.0.31.ebuild | 13 ++++++++-----
.../{argo-bin-1.0.31.ebuild => argo-bin-2.0.3.ebuild} | 17 ++++++++++-------
3 files changed, 24 insertions(+), 12 deletions(-)
diff --git a/sci-biology/argo-bin/ChangeLog b/sci-biology/argo-bin/ChangeLog
index d8c050f..01ad496 100644
--- a/sci-biology/argo-bin/ChangeLog
+++ b/sci-biology/argo-bin/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*argo-bin-2.0.3 (26 May 2015)
+
+ 26 May 2015; Martin Mokrejs <[email protected]>
+ +argo-bin-2.0.3.ebuild, argo-bin-1.0.31.ebuild:
+ sci-biology/argo-bin: ebuild cleanup; version bump
+
25 May 2015; Martin Mokrejs <[email protected]>
argo-bin-1.0.31.ebuild:
sci-biology/argo-bin: redefine S variable so we can chdir to a WORKDIR (not
diff --git a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
index 6db9160..db8efaf 100644
--- a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
+++ b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
@@ -2,23 +2,26 @@
# Distributed under the terms of the GNU General Public License v2
# $Header: $
-EAPI=4
+EAPI=5
inherit java-utils-2 toolchain-funcs
DESCRIPTION="Visualization and manually annotating whole genomes"
-HOMEPAGE="http://www.broadinstitute.org/annotation/argo/";
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+ http://www.broadinstitute.org/annotation/argo";
SRC_URI="http://www.broadinstitute.org/annotation/argo/argo.jar";
-#SRC_URI="http://www.broadinstitute.org/annotation/argo/src/workspace-2008-03-11.tgz";
+#
+# Release Number: 1.0.31
+# Release Date: 2010-02-05
LICENSE="LGPL-3"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="java"
-DEPEND=""
+DEPEND="!sci-biology/argo"
RDEPEND="${DEPEND}
- java? ( >=virtual/jre-1.4 )"
+ java? ( >=virtual/jre-1.5:* )"
S="${WORKDIR}"
diff --git a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
similarity index 51%
copy from sci-biology/argo-bin/argo-bin-1.0.31.ebuild
copy to sci-biology/argo-bin/argo-bin-2.0.3.ebuild
index 6db9160..5659a97 100644
--- a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
+++ b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
@@ -2,27 +2,30 @@
# Distributed under the terms of the GNU General Public License v2
# $Header: $
-EAPI=4
+EAPI=5
inherit java-utils-2 toolchain-funcs
DESCRIPTION="Visualization and manually annotating whole genomes"
-HOMEPAGE="http://www.broadinstitute.org/annotation/argo/";
-SRC_URI="http://www.broadinstitute.org/annotation/argo/argo.jar";
-#SRC_URI="http://www.broadinstitute.org/annotation/argo/src/workspace-2008-03-11.tgz";
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+ http://www.broadinstitute.org/annotation/argo";
+SRC_URI="http://www.broadinstitute.org/annotation/argo2/releases/argo2.jar";
+#
+# Release Number: 3
+# Release Date: 2010-06-23
LICENSE="LGPL-3"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="java"
-DEPEND=""
+DEPEND="!sci-biology/argo"
RDEPEND="${DEPEND}
- java? ( >=virtual/jre-1.4 )"
+ java? ( >=virtual/jre-1.5:* )"
S="${WORKDIR}"
src_install() {
- java-pkg_newjar "${DISTDIR}"/argo.jar argo.jar
+ java-pkg_newjar "${DISTDIR}"/argo2.jar argo2.jar
java-pkg_dolauncher
}
