commit: 8a6a3ba3790230189b2d38000056f2cff889782a Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Thu Apr 16 06:29:39 2015 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Thu Apr 16 06:29:39 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8a6a3ba3
In CVS Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> sci-geosciences/cdat-lite/ChangeLog | 26 ---------- sci-geosciences/cdat-lite/cdat-lite-5.2.ebuild | 44 ---------------- sci-geosciences/cdat-lite/cdat-lite-6.0_rc2.ebuild | 40 --------------- sci-geosciences/cdat-lite/files/5.2-impl-dec.patch | 60 ---------------------- .../cdat-lite/files/5.2-shared-lib.patch | 13 ----- sci-geosciences/cdat-lite/metadata.xml | 12 ----- 6 files changed, 195 deletions(-) diff --git a/sci-geosciences/cdat-lite/ChangeLog b/sci-geosciences/cdat-lite/ChangeLog deleted file mode 100644 index 242e267..0000000 --- a/sci-geosciences/cdat-lite/ChangeLog +++ /dev/null @@ -1,26 +0,0 @@ -# ChangeLog for sci-geosciences/cdat-lite -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 04 Dec 2013; Justin Lecher <[email protected]> cdat-lite-5.2.ebuild, - cdat-lite-6.0_rc2.ebuild, metadata.xml: - Bump to distutils-r1 eclass - -*cdat-lite-6.0_rc2 (16 Jul 2011) - - 16 Jul 2011; Tim Cera <[email protected]> +cdat-lite-6.0_rc2.ebuild: - Version bump. - - 29 Jun 2010; Justin Lecher <[email protected]> +files/5.2-impl-dec.patch, - cdat-lite-5.2.ebuild, +files/5.2-shared-lib.patch: - Python ABI fixes, implicit declaration fixes - - 24 Apr 2010; Tim Cera <[email protected]> cdat-lite-5.2.ebuild: - Updated to latest style for Python ebuilds. - -*cdat-lite-5.2 (24 Jan 2010) - - 24 Jan 2010; Tim Cera <[email protected]> +cdat-lite-5.2.ebuild, - +metadata.xml: - Initial ebuild. - diff --git a/sci-geosciences/cdat-lite/cdat-lite-5.2.ebuild b/sci-geosciences/cdat-lite/cdat-lite-5.2.ebuild deleted file mode 100644 index 6da749e..0000000 --- a/sci-geosciences/cdat-lite/cdat-lite-5.2.ebuild +++ /dev/null @@ -1,44 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 toolchain-funcs - -MY_P=${P/-/_} - -DESCRIPTION="Large suite of open source tools for the management and analysis of climate data" -HOMEPAGE="http://proj.badc.rl.ac.uk/cedaservices/wiki/CdatLite"; -SRC_URI="http://ndg.nerc.ac.uk/dist/${MY_P}.tar.gz"; - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -COMMON_DEPEND=" - >=sci-libs/netcdf-4.0.1 - >=sci-libs/hdf5-1.6.4" -DEPEND="${COMMON_DEPEND} - dev-python/setuptools[${PYTHON_USEDEP}]" -RDEPEND="${COMMON_DEPEND} - !sci-biology/ncbi-tools" - -S="${WORKDIR}"/${MY_P} - -PATCHES=( - "${FILESDIR}"/${PV}-shared-lib.patch - "${FILESDIR}"/${PV}-impl-dec.patch - ) - -python_prepare_all() { - find "${S}" -type l -exec rm '{}' \; - tc-export CC - sed \ - -e 's:libhdf5.a:libhdf5.so:g' \ - -i setup_util.py || die - distutils-r1_python_prepare_all -} diff --git a/sci-geosciences/cdat-lite/cdat-lite-6.0_rc2.ebuild b/sci-geosciences/cdat-lite/cdat-lite-6.0_rc2.ebuild deleted file mode 100644 index a2f8d48..0000000 --- a/sci-geosciences/cdat-lite/cdat-lite-6.0_rc2.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 toolchain-funcs - -MY_P=${P/-/_} -MY_P=${MY_P/_rc/rc} - -DESCRIPTION="Large suite of open source tools for the management and analysis of climate data" -HOMEPAGE="http://proj.badc.rl.ac.uk/cedaservices/wiki/CdatLite"; -SRC_URI="http://ndg.nerc.ac.uk/dist/${MY_P}.tar.gz"; - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -COMMON_DEPEND=" - >=sci-libs/netcdf-4.0.1 - >=sci-libs/hdf5-1.6.4" -DEPEND="${COMMON_DEPEND} - dev-python/setuptools[${PYTHON_USEDEP}]" -RDEPEND="${COMMON_DEPEND} - !sci-biology/ncbi-tools" - -S="${WORKDIR}/${MY_P}" - -python_prepare_all() { - find "${S}" -type l -exec rm '{}' \; - tc-export CC - sed \ - -e 's:libhdf5.a:libhdf5.so:g' \ - -i setup_util.py || die - distutils-r1_python_prepare_all -} diff --git a/sci-geosciences/cdat-lite/files/5.2-impl-dec.patch b/sci-geosciences/cdat-lite/files/5.2-impl-dec.patch deleted file mode 100644 index 866ae72..0000000 --- a/sci-geosciences/cdat-lite/files/5.2-impl-dec.patch +++ /dev/null @@ -1,60 +0,0 @@ -diff --git a/Packages/cdms2/Src/bindex.c b/Packages/cdms2/Src/bindex.c -index 9a91a3b..d8e6e4d 100644 ---- a/Packages/cdms2/Src/bindex.c -+++ b/Packages/cdms2/Src/bindex.c -@@ -2,6 +2,7 @@ - with data on non-rectilinear grids. - */ - #include <math.h> -+#include <stdio.h> - /* NBINI, NBINJ should match definition in bindex.bindexHorizontalGrid */ - #define NBINI 720 /* number of bins in the i (longitude) direction */ - #define NBINJ 360 /* number of bins in the j (latitude) direction */ -diff --git a/libcdms/src/cdunif/cdunifnc.c b/libcdms/src/cdunif/cdunifnc.c -index 75f2b2f..8af93e1 100644 ---- a/libcdms/src/cdunif/cdunifnc.c -+++ b/libcdms/src/cdunif/cdunifnc.c -@@ -28,6 +28,7 @@ - - #ifdef netcdf - #include <stdlib.h> -+#include <string.h> - #include "netcdf.h" - #include "cdunifint.h" - -diff --git a/libcdms/src/cdunif/gaddes.c b/libcdms/src/cdunif/gaddes.c -index aac8152..0dcd634 100644 ---- a/libcdms/src/cdunif/gaddes.c -+++ b/libcdms/src/cdunif/gaddes.c -@@ -20,6 +20,7 @@ - #include <stdio.h> - #include <math.h> - #include <ctype.h> -+#include <string.h> - #ifndef __APPLE__ - #include <malloc.h> - #endif -diff --git a/libcdms/src/cdunif/gaio.c b/libcdms/src/cdunif/gaio.c -index c64ae83..21b61f8 100644 ---- a/libcdms/src/cdunif/gaio.c -+++ b/libcdms/src/cdunif/gaio.c -@@ -4,6 +4,7 @@ - - #include <math.h> - #include <stdio.h> -+#include <string.h> - #ifndef __APPLE__ - #include <malloc.h> - #endif -diff --git a/libcdms/src/db_util/cdRegTrfm.c b/libcdms/src/db_util/cdRegTrfm.c -index cd88441..97d0185 100644 ---- a/libcdms/src/db_util/cdRegTrfm.c -+++ b/libcdms/src/db_util/cdRegTrfm.c -@@ -32,6 +32,7 @@ - */ - - #include <stdio.h> -+#include <string.h> - #include <cdmsint.h> - #include <isdb.h> - /* copy CDMS geom to NEONS ngeom */ diff --git a/sci-geosciences/cdat-lite/files/5.2-shared-lib.patch b/sci-geosciences/cdat-lite/files/5.2-shared-lib.patch deleted file mode 100644 index 81bec96..0000000 --- a/sci-geosciences/cdat-lite/files/5.2-shared-lib.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/setup_util.py b/setup_util.py -index 1eea295..e17342a 100644 ---- a/setup_util.py -+++ b/setup_util.py -@@ -116,7 +116,7 @@ def check_ifnetcdf4(netcdf4_incdir): - - netcdf_incdir, netcdf_libdir = DepFinder('NetCDF', 'NETCDF_HOME', - includefile='netcdf.h', -- libfile='libnetcdf.a').find() -+ libfile='libnetcdf.so').find() - # If using NetCDF4 find the HDF5 libraries - if check_ifnetcdf4(netcdf_incdir): - print 'NetCDF4 detected. Including HDF libraries' diff --git a/sci-geosciences/cdat-lite/metadata.xml b/sci-geosciences/cdat-lite/metadata.xml deleted file mode 100644 index 50f2b52..0000000 --- a/sci-geosciences/cdat-lite/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <herd>sci-geosciences</herd> - <maintainer> - <email>[email protected]</email> - <name>Tim Cera</name> - </maintainer> - <longdescription lang="en"> -CDAT-Lite is a large suite of open source tools for the management and analysis of climate data. -</longdescription> -</pkgmetadata>
