jlec        15/03/29 09:25:57

  Modified:             ChangeLog
  Added:                primer3-2.3.6.ebuild
  Removed:              primer3-2.3.4.ebuild
  Log:
  Version BUmp; drop old
  
  (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key 
B9D4F231BD1558AB!)

Revision  Changes    Path
1.41                 sci-biology/primer3/ChangeLog

file : 
http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/primer3/ChangeLog?rev=1.41&view=markup
plain: 
http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/primer3/ChangeLog?rev=1.41&content-type=text/plain
diff : 
http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/primer3/ChangeLog?r1=1.40&r2=1.41

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v
retrieving revision 1.40
retrieving revision 1.41
diff -u -r1.40 -r1.41
--- ChangeLog   14 Feb 2013 17:27:03 -0000      1.40
+++ ChangeLog   29 Mar 2015 09:25:57 -0000      1.41
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/primer3
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.40 
2013/02/14 17:27:03 jlec Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/ChangeLog,v 1.41 
2015/03/29 09:25:57 jlec Exp $
+
+*primer3-2.3.6 (29 Mar 2015)
+
+  29 Mar 2015; Justin Lecher <[email protected]> +primer3-2.3.6.ebuild,
+  -primer3-2.3.4.ebuild:
+  Version BUmp; drop old
 
 *primer3-2.3.5 (14 Feb 2013)
 



1.1                  sci-biology/primer3/primer3-2.3.6.ebuild

file : 
http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/primer3/primer3-2.3.6.ebuild?rev=1.1&view=markup
plain: 
http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/primer3/primer3-2.3.6.ebuild?rev=1.1&content-type=text/plain

Index: primer3-2.3.6.ebuild
===================================================================
# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/primer3/primer3-2.3.6.ebuild,v 
1.1 2015/03/29 09:25:57 jlec Exp $

EAPI=5

inherit eutils toolchain-funcs

DESCRIPTION="Primer Design for PCR reactions"
HOMEPAGE="http://primer3.sourceforge.net/";
SRC_URI="mirror://sourceforge/${PN}/${PV}/${PN}-src-${PV}.tar.gz"

SLOT="0"
LICENSE="GPL-2"
IUSE=""
KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos 
~sparc-solaris"

DEPEND="dev-lang/perl"
RDEPEND=""

src_prepare() {
        epatch "${FILESDIR}"/${PN}-2.3.4-buildsystem.patch

        if [[ ${CHOST} == *-darwin* ]]; then
                sed -e "s:LIBOPTS ='-static':LIBOPTS =:" -i Makefile || die
        fi

        tc-export CC CXX AR RANLIB
}

src_compile() {
        emake -C src
}

src_test () {
        emake -C test | tee "${T}"/test.log
        grep -q "\[FAILED\]" && die "test failed. See "${T}"/test.log"
}

src_install () {
        dobin src/{long_seq_tm_test,ntdpal,oligotm,primer3_core}
        dodoc src/release_notes.txt example
        insinto /opt/primer3_config
        doins -r src/primer3_config/* primer3*settings.txt
        dohtml primer3_manual.htm
}




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