commit: d6d6c3462fed95fb6a2f32d3b24239ef62187a7e Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> AuthorDate: Sun Oct 5 13:34:02 2025 +0000 Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> CommitDate: Sun Oct 5 17:44:04 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d6d6c346
sci-chemistry/tm-align: Fix build w/ cmake-4, use GNUInstallDirs Raise cmake_minimum_required to 3.28 (because ~ppc) Closes: https://bugs.gentoo.org/952793 Closes: https://bugs.gentoo.org/954309 Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org> sci-chemistry/tm-align/files/CMakeLists.txt | 7 +++++-- sci-chemistry/tm-align/tm-align-20150914-r1.ebuild | 13 +++++++++++-- 2 files changed, 16 insertions(+), 4 deletions(-) diff --git a/sci-chemistry/tm-align/files/CMakeLists.txt b/sci-chemistry/tm-align/files/CMakeLists.txt index 506ef136309e..64507389838b 100644 --- a/sci-chemistry/tm-align/files/CMakeLists.txt +++ b/sci-chemistry/tm-align/files/CMakeLists.txt @@ -1,6 +1,9 @@ -cmake_minimum_required (VERSION 2.6) +cmake_minimum_required (VERSION 3.28) project (TMTools Fortran) + +include(GNUInstallDirs) + add_executable(TMalign TMalign.f) add_executable(TMscore TMscore.f) -install (TARGETS TMalign TMscore DESTINATION bin) +install (TARGETS TMalign TMscore DESTINATION ${CMAKE_INSTALL_BINDIR}) diff --git a/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild b/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild index 800884db8138..1dd858d1b60e 100644 --- a/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild +++ b/sci-chemistry/tm-align/tm-align-20150914-r1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2023 Gentoo Authors +# Copyright 1999-2025 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 @@ -8,13 +8,22 @@ inherit cmake flag-o-matic fortran-2 DESCRIPTION="Quick & Accurate Structural Alignment" HOMEPAGE="https://zhanggroup.org/TM-align/"; SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz"; -S="${WORKDIR}" LICENSE="tm-align" SLOT="0" KEYWORDS="amd64 ~ppc ppc64 ~x86 ~amd64-linux ~x86-linux" IUSE="custom-cflags" +BDEPEND=">=dev-build/cmake-3.28" + +src_unpack() { + # S=${WORKDIR} is deprecated in cmake eclass + mkdir "${P}" || die + pushd "${P}" || die + unpack ${A} + popd || die +} + src_prepare() { cp "${FILESDIR}"/CMakeLists.txt . || die cmake_src_prepare
