commit: 33a9af2b0024c77fd990a4ca284f1137bc2dddbe Author: Pacho Ramos <pacho <AT> gentoo <DOT> org> AuthorDate: Thu May 22 14:00:54 2025 +0000 Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org> CommitDate: Thu May 22 14:07:34 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=33a9af2b
sci-chemistry/dssp: add 4.5.3 Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org> sci-chemistry/dssp/Manifest | 1 + sci-chemistry/dssp/dssp-4.5.3.ebuild | 53 ++++++++++++++++++++++++++++++++++++ 2 files changed, 54 insertions(+) diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index 7b84cf3a824b..77e29ee7c7cc 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -2,3 +2,4 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1b DIST dssp-4.4.10.tar.gz 164259 BLAKE2B 5d82ce25779060f89b50742683102aea53984fca10e54aa3cd0b21c7be3684336f6561928282e40300bb164c5b881797fababa5175c139f5b304a952f21db661 SHA512 1bdbdd4b058801d78cc28dcb23478656dfb322ce81f4fe8ede2cd72640778084ce8c99aff367aff53c26ad221ffa6ebafcf9730005b1a873957d26eb42f724c8 DIST dssp-4.4.11.tar.gz 163930 BLAKE2B 00da516faeac6f49a6b2b82d69c6e92a53531e2a0cf98718e7fa78f848b060b9f2d68f255e958842ff748119f7f3de2a06e5d6fffd4c1787485a81562185ffb7 SHA512 3abe6d6f5578714358c551bc4d4426c5359f68329058deb50fe4f643e4b380e7fa41de7aeb9d016211d69b72c7d892c17d5268b34b65c1566ff33ae978ee6f9b DIST dssp-4.5.0.tar.gz 163776 BLAKE2B aed788363920b800d552cb098490b47ceb38021a8dc2d3fcb3fe3d546d54dd3fd0499ecbf01af6719cfc03752f31205d2be8f249ae52176a4613791856a4cffd SHA512 161c529b31273970a7dd45c587e443db8bbee2565ea5d8e647c768402b3eded885537d8a728cd638df3fb4d6cf3775073ef1193fe3e0bfa66f77ac9b79ae0f4f +DIST dssp-4.5.3.tar.gz 222761 BLAKE2B f233979eb4cc467c54301c9b88cf1f0edc297500715414bbca91a4084ed90bb10300a2cc9bfa2a388e6f852a7dea141293e5cc2de91834967e160157fcdfbeff SHA512 453f20a8959dbafec8781b3b41f4bd94720200ff5a6647db95fb65bae274236a32180960072d481d27cde8d09053b844bb0b2eaef471f870f2bc4df827f5a7da diff --git a/sci-chemistry/dssp/dssp-4.5.3.ebuild b/sci-chemistry/dssp/dssp-4.5.3.ebuild new file mode 100644 index 000000000000..2488a9a03d48 --- /dev/null +++ b/sci-chemistry/dssp/dssp-4.5.3.ebuild @@ -0,0 +1,53 @@ +# Copyright 1999-2025 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +inherit cmake + +DESCRIPTION="The protein secondary structure standard" +HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp"; +SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +# doc disabled as it only generates a PDF from the manpage for now +# https://github.com/PDB-REDO/dssp/issues/64 +#IUSE="doc" + +CDEPEND=" + dev-libs/boost:=[zlib] + >=dev-libs/libmcfp-1.4.2 + >=sci-libs/libcifpp-8.0.1 +" +BDEPEND="${CDEPEND} + dev-cpp/catch:0 +" +# doc? ( +# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc ) +# dev-python/weasyprint +# ) +RDEPEND="${CDEPEND}" + +#src_prepare() { +# # wkhtmltopdf is not available on Gentoo +# sed -i -e \ +# 's/-t html/-t html --pdf-engine=weasyprint/' \ +# CMakeLists.txt +# cmake_src_prepare +#} + +src_configure() { + local mycmakeargs=( + -DINSTALL_LIBRARY=YES + #-DBUILD_DOCUMENTATION=$(usex doc) + -DBUILD_DOCUMENTATION=NO + ) + cmake_src_configure +} + +src_install() { + cmake_src_install + # Collides with libcifpp provided file + rm -v "${ED}/usr/share/libcifpp/mmcif_pdbx.dic" || die +}
