commit: 53f3408793c23dd0612952d22bc4a6c599e2b295
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 9 16:44:10 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 9 16:44:10 2015 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=53f34087
respect CC and CFLAGS; added an ebuild for latest release tarball, works
Package-Manager: portage-2.2.15
sci-biology/sickle/ChangeLog | 6 ++++++
.../sickle/{sickle-9999.ebuild => sickle-1.33.ebuild} | 17 ++++++++++++++---
sci-biology/sickle/sickle-9999.ebuild | 17 ++++++++++++++---
3 files changed, 34 insertions(+), 6 deletions(-)
diff --git a/sci-biology/sickle/ChangeLog b/sci-biology/sickle/ChangeLog
index 443ff95..4d539a2 100644
--- a/sci-biology/sickle/ChangeLog
+++ b/sci-biology/sickle/ChangeLog
@@ -2,6 +2,12 @@
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*sickle-1.33 (09 Mar 2015)
+
+ 09 Mar 2015; Martin Mokrejs <[email protected]>
+sickle-1.33.ebuild,
+ sickle-9999.ebuild:
+ respect CC and CFLAGS; added an ebuild for latest release tarball, works
+
15 Jan 2015; Martin Mokrejs <[email protected]> sickle-9999.ebuild:
correct package description
diff --git a/sci-biology/sickle/sickle-9999.ebuild
b/sci-biology/sickle/sickle-1.33.ebuild
similarity index 52%
copy from sci-biology/sickle/sickle-9999.ebuild
copy to sci-biology/sickle/sickle-1.33.ebuild
index 022474e..2288aea 100644
--- a/sci-biology/sickle/sickle-9999.ebuild
+++ b/sci-biology/sickle/sickle-1.33.ebuild
@@ -4,21 +4,32 @@
EAPI=5
-inherit eutils git-r3
+inherit eutils eutils toolchain-funcs
+
+[ "$PV" == "9999" ] && inherit git-r3
DESCRIPTION="Windowed adaptive quality-based trimming tool for FASTQ data from
Illumina/Solexa"
HOMEPAGE="https://github.com/najoshi/sickle";
-EGIT_REPO_URI="https://github.com/najoshi/sickle";
+if [ "$PV" == "9999" ]; then
+ EGIT_REPO_URI="https://github.com/najoshi/sickle";
+ KEYWORDS=""
+else
+ SRC_URI="https://github.com/najoshi/sickle/archive/v"${PV}".tar.gz";
+ KEYWORDS="~amd64"
+fi
LICENSE="MIT"
SLOT="0"
-KEYWORDS="~amd64"
IUSE=""
DEPEND=""
RDEPEND="${DEPEND}
sys-libs/zlib"
+src_prepare(){
+ sed -e "s#-pedantic#-pedantic ${CFLAGS}#;s#gcc#"$(tc-getCC)"#" -i
Makefile || die
+}
+
src_install(){
dobin sickle
dodoc README.md
diff --git a/sci-biology/sickle/sickle-9999.ebuild
b/sci-biology/sickle/sickle-9999.ebuild
index 022474e..2288aea 100644
--- a/sci-biology/sickle/sickle-9999.ebuild
+++ b/sci-biology/sickle/sickle-9999.ebuild
@@ -4,21 +4,32 @@
EAPI=5
-inherit eutils git-r3
+inherit eutils eutils toolchain-funcs
+
+[ "$PV" == "9999" ] && inherit git-r3
DESCRIPTION="Windowed adaptive quality-based trimming tool for FASTQ data from
Illumina/Solexa"
HOMEPAGE="https://github.com/najoshi/sickle";
-EGIT_REPO_URI="https://github.com/najoshi/sickle";
+if [ "$PV" == "9999" ]; then
+ EGIT_REPO_URI="https://github.com/najoshi/sickle";
+ KEYWORDS=""
+else
+ SRC_URI="https://github.com/najoshi/sickle/archive/v"${PV}".tar.gz";
+ KEYWORDS="~amd64"
+fi
LICENSE="MIT"
SLOT="0"
-KEYWORDS="~amd64"
IUSE=""
DEPEND=""
RDEPEND="${DEPEND}
sys-libs/zlib"
+src_prepare(){
+ sed -e "s#-pedantic#-pedantic ${CFLAGS}#;s#gcc#"$(tc-getCC)"#" -i
Makefile || die
+}
+
src_install(){
dobin sickle
dodoc README.md
