commit: 34151feaa9a7a76e95c5e1cc72fabc0d52480276 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 16 19:02:07 2014 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Sat Mar 22 09:44:40 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=34151fea
sci-biology/samstat: new package Package-Manager: portage-2.2.7 --- sci-biology/samstat/ChangeLog | 9 +++++++++ sci-biology/samstat/metadata.xml | 9 +++++++++ sci-biology/samstat/samstat-20130708.ebuild | 29 +++++++++++++++++++++++++++++ 3 files changed, 47 insertions(+) diff --git a/sci-biology/samstat/ChangeLog b/sci-biology/samstat/ChangeLog new file mode 100644 index 0000000..10d5f58 --- /dev/null +++ b/sci-biology/samstat/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/samstat +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*samstat-20130708 (16 Mar 2014) + + 16 Mar 2014; Martin Mokrejs <[email protected]> +metadata.xml, + +samstat-20130708.ebuild: + sci-biology/samstat: new package diff --git a/sci-biology/samstat/metadata.xml b/sci-biology/samstat/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/samstat/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/samstat/samstat-20130708.ebuild b/sci-biology/samstat/samstat-20130708.ebuild new file mode 100644 index 0000000..c694799 --- /dev/null +++ b/sci-biology/samstat/samstat-20130708.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils + +DESCRIPTION="Show statistics of BAM/SAM file contents (error profiles, nucleotide composition, base quals, length distribution)" +HOMEPAGE="http://samstat.sourceforge.net"; +SRC_URI="http://sourceforge.net/projects/samstat/files/samstat.tgz"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/"${PN}"/src + +src_compile(){ + emake +} + +src_install(){ + dobin samstat +}
