After the aclocal/automake regeneration, I now am seeing a bootstrap failure on AIX because the generated Makefile is not substituting a variable. My generated Makefile looks like:
CC = /tmp/20060801/./gcc/xgcc -B/tmp/20060801/./gcc/ -B/farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/bin/ -B/farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/lib/ -isystem /farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/include -isystem /farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/sys-include CFLAGS = @CFLAGS@ CPP = /tmp/20060801/./gcc/xgcc -B/tmp/20060801/./gcc/ -B/farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/bin/ -B/farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/lib/ -isystem /farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/include -isystem /farm/dje/install/powerpc-ibm-aix5.2.0.0-20060801/powerpc-ibm-aix5.2.0.0/sys-include -E GCC does not like @CFLAGS@ as a commandline option. Something was not regenerated properly. David