External Email - Use Caution
Hi
When running recon-all autorecon2, on a single subject with
(Macbook Pro 10.15.6 (19G2021),
freesurfer-darwin-macOS-7.1.0-20200511-813297b)
it handles the rh.curv without a problem, but for the lh kicks out this
error:
/Users...$subj.../surf
\n mris_curvature_stats -m --writeCurvatureFiles -G -o
../stats/lh.curv.stats -F smoothwm $subj lh curv sulc \n
Toggling save flag on curvature files [
ok ]
Outputting results using filestem [
../stats/lh.curv.stats ]
Toggling save flag on curvature files [
ok ]
Setting surface [ $subj./lh.smoothwm ]
Reading surface... [
ok ]
Setting texture [
curv ]
Reading texture...error: No such file or
directory
error: MRISreadCurvature: could not open /Users/$subj./surf/lh.curv
***WARNING!***
Some error has occurred while reading 'lh.curv'.
This might be due a vertex incompatibility
between the surface 'lh.smoothwm' and curv 'lh.curv'.
You might be able to correct this by re-running
'mris_make_surfaces' on this dataset.
Skipping this (and any remaining) curvature files.
Any measurements / calcuations that depend on the
curvature file will be skipped.
*************
Note /Users/$subj./surf/lh.curv does exist in the subject's surf folder.
I ran it twice just to be sure. I don't find an answer for the problem in
the freesurfer list. Any guidance will be much appreciated!
Cheers
James Hartzell, PhD (2x)
Donostia-San Sebatián, Spain
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