by the way, this is the output from xprop for this persistent wait-
overlay:

[redacted]:~$ xprop
_GTK_EDGE_CONSTRAINTS(CARDINAL) = 170
_NET_WM_STATE(ATOM) = _NET_WM_STATE_SKIP_PAGER, _NET_WM_STATE_SKIP_TASKBAR
_NET_WM_ALLOWED_ACTIONS(ATOM) = _NET_WM_ACTION_CHANGE_DESKTOP, 
_NET_WM_ACTION_ABOVE, _NET_WM_ACTION_BELOW
WM_HINTS(WM_HINTS):
                Client accepts input or input focus: True
                Initial state is Normal State.
                window id # of group leader: 0x3800002
XdndAware(ATOM) = BITMAP
_NET_WM_SYNC_REQUEST_COUNTER(CARDINAL) = 58721511, 58721512
_NET_WM_USER_TIME_WINDOW(WINDOW): window id # 0x38004e6
WM_CLIENT_LEADER(WINDOW): window id # 0x3800002
_NET_WM_PID(CARDINAL) = 64290
WM_LOCALE_NAME(STRING) = "en_US.UTF-8"
WM_CLIENT_MACHINE(STRING) = [redacted]
WM_NORMAL_HINTS(WM_SIZE_HINTS):
                program specified size: 1 by 1
WM_PROTOCOLS(ATOM): protocols  WM_DELETE_WINDOW, WM_TAKE_FOCUS, _NET_WM_PING, 
_NET_WM_SYNC_REQUEST
WM_CLASS(STRING) = "org.gnome.Nautilus", "org.gnome.Nautilus"
WM_ICON_NAME(STRING) = "org.gnome.Nautilus"
_NET_WM_ICON_NAME(UTF8_STRING) = "org.gnome.Nautilus"
WM_NAME(STRING) = "org.gnome.Nautilus"
_NET_WM_NAME(UTF8_STRING) = "org.gnome.Nautilus"

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You received this bug notification because you are a member of Desktop
Packages, which is subscribed to nautilus in Ubuntu.
https://bugs.launchpad.net/bugs/2097101

Title:
  Wait overlay from Nautilus does not dissappear

Status in nautilus package in Ubuntu:
  Incomplete

Bug description:
  Ubuntu 24.04.01 LTS x11
  Reproducable on my system:
  Drag-and-drop pdf file from Files/Nautilus into Inkscape, i get 'Wait' Icon 
and later 'Wait/Forcequit' question (OK) - answered 'Force quit'. Inkscape was 
closed (OK). 'Wait' (depending on the file either a generic clockface or a 
preview of the file) icon still overlys everything (Not OK). Icon persists as 
overlay for eternity, or until system reboot. Closing all Nautilus windows will 
make it dissappear after 10 seconds.

  Expected:
  Wait Icon dissappears as soon as the force-quit application is shut down, 
i.e. as soon as the wait is over.

  ProblemType: Bug
  DistroRelease: Ubuntu 24.04
  Package: nautilus 1:46.2-0ubuntu0.3
  ProcVersionSignature: Ubuntu 6.8.0-52.53-generic 6.8.12
  Uname: Linux 6.8.0-52-generic x86_64
  ApportVersion: 2.28.1-0ubuntu3.3
  Architecture: amd64
  CasperMD5CheckResult: pass
  CurrentDesktop: ubuntu:GNOME
  Date: Fri Jan 31 12:59:44 2025
  InstallationDate: Installed on 2023-01-18 (744 days ago)
  InstallationMedia: Ubuntu 22.04.1 LTS "Jammy Jellyfish" - Release amd64 
(20220809.1)
  SourcePackage: nautilus
  UpgradeStatus: Upgraded to noble on 2024-12-16 (46 days ago)
  usr_lib_nautilus:
   file-roller                       44.3-0ubuntu1
   nautilus-dropbox                  2019.02.14-1.2build2
   nautilus-extension-gnome-terminal 3.52.0-1ubuntu2
   nautilus-share                    0.7.5-0.3build2

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