Never had this problem on my fully patched  Ubuntu 16.04 until just
recently, when I noticed that the Firefox menus do not display after
restoring from a suspend.  gnome-terminal and gedit are OK.  Iconizing
Firefox, then restoring, restores the menus to working condition. Same
sorts of errors in   ~/.cache/upstart/unity-panel-service.log as seen
earlier.

cat ~/.cache/upstart/unity-panel-service.log

(unity-panel-service:2121): Indicator-Appmenu-WARNING **: Already have a menu 
for window ID 65011728 with path /com/canonical/menu/3E00010 from :1.81, 
unregistering that one
(unity-panel-service:2121): Indicator-Appmenu-CRITICAL **: menus_destroyed: 
assertion 'IS_WINDOW_MENU(wm)' failed
(unity-panel-service:2121): Indicator-Appmenu-CRITICAL **: menus_destroyed: 
assertion 'IS_WINDOW_MENU(wm)' failed
(unity-panel-service:2121): LIBDBUSMENU-GLIB-WARNING **: Unable to get menu 
proxy: Operation was cancelled
(unity-panel-service:2121): Indicator-Appmenu-CRITICAL **: 
window_menu_model_new: assertion 'BAMF_IS_APPLICATION(app)' failed
(unity-panel-service:2121): Indicator-Appmenu-CRITICAL **: track_menus: 
assertion 'IS_WINDOW_MENU(menus)' failed  

The window 3E00010 is the Firefox window. No unity process has died or
been restarted. The bamfdaemon has been running since boot.

What recently changed was adding a script to kill compiz returning from
a suspend, so the Nvidia driver 375.39 screen artifacts get removed.

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You received this bug notification because you are a member of Desktop
Packages, which is subscribed to bamf in Ubuntu.
https://bugs.launchpad.net/bugs/1532226

Title:
  No menu bar in gtk apps on fresh boot

Status in Release Notes for Ubuntu:
  Fix Released
Status in bamf package in Ubuntu:
  Fix Released
Status in bamf source package in Xenial:
  Fix Released

Bug description:
  Seen here in fresh 16.04 install using 01/07/16 image.
  Around 35% of fresh boots or restarts results in no menus in unity panel for 
most apps, notable exceptions are firefox & thunderbird
  A log out/in restores functionality.
  When this occurs there is nothing in any of the ~/.cache/upstart logs of 
obvious note

  Test case:
  fresh install, no changes
  Do a number of restarts from system settings, using either restart > restart 
or shutdown > restart, here randomly picked one or the other
  What happens here: 
  around 35% of the time the login has no menus in the unity panel for most 
apps.

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