Your message dated Tue, 01 Apr 2008 11:59:48 -0600
with message-id <[EMAIL PROTECTED]>
and subject line WNPP bug closing
has caused the Debian Bug report #416269,
regarding ITP: pdb2pqr -- Converts Protein Data Bank (PDB) files to PQR
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [EMAIL PROTECTED]
immediately.)
--
416269: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=416269
Debian Bug Tracking System
Contact [EMAIL PROTECTED] with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz <[EMAIL PROTECTED]>
* Package name : pdb2pqr
Version : 1.1.2
Upstream Author : Todd Dolinsky <[EMAIL PROTECTED]>
* URL : http://pdb2pqr.sourceforge.net/
* License : GPL
Programming Lang: Python, C
Description : Converts Protein Data Bank (PDB) files to PQR
From the PDB2PQR hompage:
"PDB2PQR is a Python software package that automates many of the
common tasks of preparing structures for continuum electrostatics
calculations. This includes adding a limited number of missing
heavy atoms to biomolecular structures, optimizing the protein
for favorable hydrogen bonding, determining side-chain pKas, and
assigning charge and radius parameters from a variety of force
fields, ultimately yielding a final PQR file."
PDB2PQR is a tool often used in conjunction with APBS, which is in
Debian already. I have had good contact with both upstream authors
in the past.
-- System Information:
Debian Release: 4.0
APT prefers testing
APT policy: (500, 'testing')
Architecture: amd64 (x86_64)
Shell: /bin/sh linked to /bin/bash
Kernel: Linux 2.6.18-4-amd64
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
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--- End Message ---
--- Begin Message ---
Hello,
This is an automatic mail sent to close the ITP you have reported or
are involved with.
Your ITP wnpp bug is being closed because of the following reasons:
- It is, as of today, older than 365 days.
- It hasn't had any activity recently.
As this is an automatic procedure, it could of course have something
wrong and probably it would be closing some bugs that are not
intended by owners and submitters (like you) to be closed, for
example if the ITP is still of your interest, or there has been
some kind of activity around it. In that case, please reopen the
bug, do it, DO IT NOW! (I don't want to be blamed because of
mass closing and not let people know that they can easily reopen
their bugs ;-).
To re-open it, you simply have to mail [EMAIL PROTECTED]
with a body text like this:
reopen 416269
stop
Further comments on the work done in the bug sent to
[EMAIL PROTECTED] would be truly welcomed.
Anyway, if you have any kind of problems when dealing with
the BTS, feel free to contact me and I'd be more than happy to help
you on this: <[EMAIL PROTECTED]>.
A similar process is being applied to other kind of wnpp bugs.
Thanks for your cooperation,
-- David Moreno Garza <[EMAIL PROTECTED]>.
--- End Message ---
