Your message dated Wed, 21 Nov 2007 22:36:03 +0000
with message-id <[EMAIL PROTECTED]>
and subject line Bug#445983: fixed in dialign-t 0.2.2.dfsg-1
has caused the attached Bug report to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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Debian bug tracking system administrator
(administrator, Debian Bugs database)
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <[EMAIL PROTECTED]>
Package name : dialign-t
Version : 0.2.2
Upstream Author : Amarendran R. Subramanian
<subraman[nospam_AT]informatik[dot]uni[dash]tuebingen[dot]de>
URL : http://dialign-t.gobics.de/
License : LGPL
Programming Lang: C
Description : Segment-based multiple sequence alignment
DIALIGN-T is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2. For pairwise
alignment, DIALIGN-T uses a fragment-chaining algorithm that favours chains of
low-scoring local alignments over isolated high-scoring fragments. For
multiple alignment, DIALIGN-T uses an improved greedy procedure that is less
sensitive to spurious local sequence similarities. DIALIGN-T has been
published in Amarendran R. Subramanian, Jan Weyer-Menkhoff, Michael Kaufmann,
Burkhard Morgenstern: DIALIGN-T: An improved algorithm for segment-based
multiple sequence alignment. BMC Bioinformatics 2005, 6:66.
DIALIGN-T is needed by dm_coffee, a special mode of t_coffee prepared
especially for Debian, in which non-free alignment software was replaced by
free alternatives.
--- End Message ---
--- Begin Message ---
Source: dialign-t
Source-Version: 0.2.2.dfsg-1
We believe that the bug you reported is fixed in the latest version of
dialign-t, which is due to be installed in the Debian FTP archive:
dialign-t-data_0.2.2.dfsg-1_all.deb
to pool/main/d/dialign-t/dialign-t-data_0.2.2.dfsg-1_all.deb
dialign-t_0.2.2.dfsg-1.diff.gz
to pool/main/d/dialign-t/dialign-t_0.2.2.dfsg-1.diff.gz
dialign-t_0.2.2.dfsg-1.dsc
to pool/main/d/dialign-t/dialign-t_0.2.2.dfsg-1.dsc
dialign-t_0.2.2.dfsg-1_i386.deb
to pool/main/d/dialign-t/dialign-t_0.2.2.dfsg-1_i386.deb
dialign-t_0.2.2.dfsg.orig.tar.gz
to pool/main/d/dialign-t/dialign-t_0.2.2.dfsg.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [EMAIL PROTECTED],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Charles Plessy <[EMAIL PROTECTED]> (supplier of updated dialign-t package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [EMAIL PROTECTED])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Mon, 19 Nov 2007 23:45:20 +0900
Source: dialign-t
Binary: dialign-t-data dialign-t
Architecture: source i386 all
Version: 0.2.2.dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <[EMAIL PROTECTED]>
Changed-By: Charles Plessy <[EMAIL PROTECTED]>
Description:
dialign-t - Segment-based multiple sequence alignment
dialign-t-data - Common data files for dialign-t
Closes: 445983
Changes:
dialign-t (0.2.2.dfsg-1) unstable; urgency=low
.
* Removed upstream documentation.
* Initial release (Closes: #445983)
Files:
590f3d2a45b15106bc5fa8671b94754e 888 science optional
dialign-t_0.2.2.dfsg-1.dsc
fe3d3db71a18efb790ea7297da361212 1532124 science optional
dialign-t_0.2.2.dfsg.orig.tar.gz
e9a2d714c7f076659931948431d022f6 6527 science optional
dialign-t_0.2.2.dfsg-1.diff.gz
7aa4f0e491e765c260c2a13804e152ff 32400 science optional
dialign-t_0.2.2.dfsg-1_i386.deb
9ab454abd7a082b018cfff406b97f3a3 1475018 science optional
dialign-t-data_0.2.2.dfsg-1_all.deb
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