Your message dated Fri, 19 Jul 2024 18:00:19 +0000
with message-id <e1surtz-002dir...@fasolo.debian.org>
and subject line Bug#1076039: fixed in r-bioc-pwalign 1.0.0-1
has caused the Debian Bug report #1076039,
regarding ITP: r-bioc-pwalign -- Perform pairwise sequence alignments
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1076039: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1076039
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-pwalign -- Perform pairwise sequence alignments
Package: wnpp
Owner: Michael R. Crusoe <cru...@debian.org>
Severity: wishlist
* Package name : r-bioc-pwalign
Version : 1.0.0
Upstream Author : Patrick Aboyoun,
* URL : https://bioconductor.org/packages/pwalign
* License : Artistic-2.0
Programming Lang: GNU R
Description : Perform pairwise sequence alignments
The two main functions in the package are pairwiseAlignment() and
stringDist(). The former solves (Needleman-Wunsch) global alignment,
(Smith-Waterman) local alignment, and (ends-free) overlap alignment
problems. The latter computes the Levenshtein edit distance or pairwise
alignment score matrix for a set of strings.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-pwalign
This package is a build-dep for r-bioc-shortread & Bioconductor 3.19
OpenPGP_signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: r-bioc-pwalign
Source-Version: 1.0.0-1
Done: Michael R. Crusoe <cru...@debian.org>
We believe that the bug you reported is fixed in the latest version of
r-bioc-pwalign, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1076...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <cru...@debian.org> (supplier of updated r-bioc-pwalign
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 09 Jul 2024 21:09:10 +0200
Source: r-bioc-pwalign
Binary: r-bioc-pwalign r-bioc-pwalign-dbgsym
Architecture: source amd64
Version: 1.0.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net>
Changed-By: Michael R. Crusoe <cru...@debian.org>
Description:
r-bioc-pwalign - Perform pairwise sequence alignments
Closes: 1076039
Changes:
r-bioc-pwalign (1.0.0-1) unstable; urgency=medium
.
* Initial release (closes: #1076039)
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