Package: wnpp Severity: wishlist Subject: ITP: cat-bat -- tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) Package: wnpp Owner: Andreas Tille <ti...@debian.org> Severity: wishlist
* Package name : cat-bat Version : 5.0.4 Upstream Author : Universiteit Utrecht * URL : https://github.com/dutilh/CAT * License : MIT Programming Lang: Python Description : tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines for the taxonomic classification of long DNA sequences and metagenome assembled genomes (MAGs/bins) of both known and (highly) unknown microorganisms, as generated by contemporary metagenomics studies. The core algorithm of both programs involves gene calling, mapping of predicted ORFs against the nr protein database, and voting-based classification of the entire contig / MAG based on classification of the individual ORFs. CAT and BAT can be run from intermediate steps if files are formatted appropriately. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/cat-bat
