Your message dated Fri, 15 May 2020 18:00:12 +0000
with message-id <e1jzed2-000h38...@fasolo.debian.org>
and subject line Bug#960523: fixed in parallel-fastq-dump 0.6.6-1
has caused the Debian Bug report #960523,
regarding ITP: parallel-fastq-dump -- parallel fastq-dump wrapper
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
960523: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=960523
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Subject: ITP: parallel-fastq-dump -- parallel fastq-dump wrapper
Package: wnpp
Owner: Andreas Tille <ti...@debian.org>
Severity: wishlist
* Package name : parallel-fastq-dump
Version : 0.6.6
Upstream Author : Renan Valieris
* URL : https://github.com/rvalieris/parallel-fastq-dump
* License : MIT
Programming Lang: Python
Description : parallel fastq-dump wrapper
NCBI fastq-dump can be very slow sometimes, even if you have the
resources (network, IO, CPU) to go faster, even if you already
downloaded the sra file (see the protip below). This tool speeds up the
process by dividing the work into multiple threads.
.
This is possible because fastq-dump have options (-N and -X) to query
specific ranges of the sra file, this tool works by dividing the work
into the requested number of threads, running multiple fastq-dump in
parallel and concatenating the results back together, as if you had just
executed a plain fastq-dump call.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/parallel-fastq-dump
--- End Message ---
--- Begin Message ---
Source: parallel-fastq-dump
Source-Version: 0.6.6-1
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
parallel-fastq-dump, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 960...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated parallel-fastq-dump
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 13 May 2020 16:41:29 +0200
Source: parallel-fastq-dump
Binary: parallel-fastq-dump
Architecture: source all
Version: 0.6.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
parallel-fastq-dump - parallel fastq-dump wrapper
Closes: 960523
Changes:
parallel-fastq-dump (0.6.6-1) unstable; urgency=medium
.
* Initial release (Closes: #960523)
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