Your message dated Fri, 12 Apr 2013 10:00:05 +0000
with message-id <e1uqam5-00021u...@franck.debian.org>
and subject line Bug#686000: fixed in zalign 0.9.1-1
has caused the Debian Bug report #686000,
regarding RFH: zalign -- <missing description>
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
686000: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=686000
Debian Bug Tracking System
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--- Begin Message ---
Package: wnpp
Severity: normal
Hello,
I have prepared a package for zalign
Description: parallel local alignment of biological sequences
zAlign is a local sequence aligner, especially intended for use with
large biological DNA sequences, with more than 1Mbp (Millions of base
pairs). It uses the Smith-Waterman exact algorithm with affine gap cost
function to perform this task.
.
zAlign can be used both in distributed (clusters, for
example) or standalone environments. Currently it has
been tested on Linux and Sun Solaris, using both the MPICH
(http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI
(http://www.open-mpi.org/) implementations. Ports for other Unix-like
environments are highly considered.
in some still rudimentary way, just for local needs. If anybody felt
like improving packaging so it can be uploaded to the distribution,
this would be excellent. I am around for mentoring. Build instructions
are placed with Debian Med at
http://anonscm.debian.org/viewvc/debian-med/trunk/packages/zalign/trunk/debian/
Many thanks and kind regards,
Steffen
--- End Message ---
--- Begin Message ---
Source: zalign
Source-Version: 0.9.1-1
We believe that the bug you reported is fixed in the latest version of
zalign, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 686...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated zalign package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 21 Feb 2013 16:21:25 +0100
Source: zalign
Binary: zalign
Architecture: source amd64
Version: 0.9.1-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
zalign - parallel local alignment of biological sequences
Closes: 686000
Changes:
zalign (0.9.1-1) unstable; urgency=low
.
* Initial release (Closes: #686000)
Checksums-Sha1:
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Files:
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zalign_0.9.1.orig.tar.gz
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zalign_0.9.1-1.debian.tar.gz
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zalign_0.9.1-1_amd64.deb
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--- End Message ---
