Package: wnpp Severity: normal Hello,
I have prepared a package for zalign Description: parallel local alignment of biological sequences zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task. . zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered. in some still rudimentary way, just for local needs. If anybody felt like improving packaging so it can be uploaded to the distribution, this would be excellent. I am around for mentoring. Build instructions are placed with Debian Med at http://anonscm.debian.org/viewvc/debian-med/trunk/packages/zalign/trunk/debian/ Many thanks and kind regards, Steffen -- To UNSUBSCRIBE, email to debian-wnpp-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/503b7d70.5090...@gmx.de
