Your message dated Thu, 07 Jun 2012 21:32:21 +0000
with message-id <e1sckjz-0005xd...@franck.debian.org>
and subject line Bug#552101: fixed in beast-mcmc 1.6.2-1
has caused the Debian Bug report #552101,
regarding RFP: beast-mcmc -- Bayesian MCMC analysis of molecular sequences
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
552101: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=552101
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Felix Feyertag <felix.feyer...@googlemail.com>
Source: beast-mcmc
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Felix Feyertag <felix.feyer...@googlemail.com>
Build-Depends: debhelper (>= 7)
Standards-Version: 3.8.0
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/beast-mcmc/trunk/?rev=0&sc=0
Vcs-Svn:
svn://svn.debian.org/svn/debian-med/trunk/packages/beast-mcmc/trunk/
XS-Autobuild: yes
Homepage: http://beast.bio.ed.ac.uk/
Package: beast-mcmc
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: Bayesian MCMC analysis of molecular sequences
BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
sequences. It is entirely orientated towards rooted, time-measured
phylogenies inferred using strict or relaxed molecular clock models. It
can be used as a method of reconstructing phylogenies but is also a
framework for testing evolutionary hypotheses without conditioning on a
single tree topology. BEAST uses MCMC to average over tree space, so that
each tree is weighted proportional to its posterior probability. Included
is a simple to use user-interface program for setting up standard
analyses and a suit of programs for analysing the results.
.
When publishing results using this software please cite:
Drummond AJ, Rambaut A (2007) "BEAST: Bayesian evolutionary analysis by
sampling trees." BMC Evolutionary Biology 7:214
Name: BEAST-MCMC
Source: http://beast-mcmc.googlecode.com/svn/trunk/
Copyright: © 2002-2006 Alexei Drummond and Andrew Rambaut
License: LGPL-2
BEAST is distributed under the terms of the GNU Lesser General Public
License.
See the notice in individual files and the file LICENSE for licensing
details.
On a Debian GNU/Linux system, the GNU Lesser GPL license version 2 is
included
in the file ‘/usr/share/common-licenses/LGPL-2’, and the GNU GPL license
version 2 is included in the file ‘/usr/share/common-licenses/GPL-2’.
License: other
BEAST includes software libraries from projects whose licensing
terms require that the following notices be included when they are
distributed in binary form and that the recipient be given a copy of
their respective licenses.
This product includes software developed by the
JDOM Project (http://www.jdom.org/)
This product includes software developed by
The Apache Software Foundation (http://www.apache.org/)
The license for JDOM can be read in the LICENSE.txt file in the
source distribution available at http://www.jdom.org/
The license for the Commons Math library can be read at
http://www.apache.org/licenses/LICENSE-2.0 or in the LICENSE.txt file
in the source distribution available at
http://jakarta.apache.org/commons/math/
--- End Message ---
--- Begin Message ---
Source: beast-mcmc
Source-Version: 1.6.2-1
We believe that the bug you reported is fixed in the latest version of
beast-mcmc, which is due to be installed in the Debian FTP archive:
beast-doc_1.6.2-1_all.deb
to contrib/b/beast-mcmc/beast-doc_1.6.2-1_all.deb
beast-examples_1.6.2-1_all.deb
to contrib/b/beast-mcmc/beast-examples_1.6.2-1_all.deb
beast-mcmc-lib_1.6.2-1_amd64.deb
to contrib/b/beast-mcmc/beast-mcmc-lib_1.6.2-1_amd64.deb
beast-mcmc_1.6.2-1.debian.tar.gz
to contrib/b/beast-mcmc/beast-mcmc_1.6.2-1.debian.tar.gz
beast-mcmc_1.6.2-1.dsc
to contrib/b/beast-mcmc/beast-mcmc_1.6.2-1.dsc
beast-mcmc_1.6.2-1_all.deb
to contrib/b/beast-mcmc/beast-mcmc_1.6.2-1_all.deb
beast-mcmc_1.6.2.orig.tar.xz
to contrib/b/beast-mcmc/beast-mcmc_1.6.2.orig.tar.xz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 552...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated beast-mcmc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 05 Jun 2012 14:38:11 +0200
Source: beast-mcmc
Binary: beast-mcmc beast-mcmc-lib beast-examples beast-doc
Architecture: source all amd64
Version: 1.6.2-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
beast-doc - Bayesian MCMC phylogenetic inference - documentation
beast-examples - Bayesian MCMC phylogenetic inference - example data
beast-mcmc - Bayesian MCMC phylogenetic inference
beast-mcmc-lib - Bayesian MCMC phylogenetic inference
Closes: 552101
Changes:
beast-mcmc (1.6.2-1) unstable; urgency=low
.
* Initial release. (Closes: #552101)
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beast-mcmc_1.6.2-1.dsc
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beast-mcmc_1.6.2-1.debian.tar.gz
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beast-mcmc_1.6.2-1_all.deb
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beast-mcmc-lib_1.6.2-1_amd64.deb
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beast-examples_1.6.2-1_all.deb
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beast-doc_1.6.2-1_all.deb
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--- End Message ---
