Author: tille
Date: 2012-07-23 14:00:08 +0000 (Mon, 23 Jul 2012)
New Revision: 11872
Added:
trunk/packages/trimmomatic/trunk/debian/get-orig-source
Removed:
trunk/packages/trimmomatic/trunk/debian/README.source
Modified:
trunk/packages/trimmomatic/trunk/debian/rules
trunk/packages/trimmomatic/trunk/debian/watch
Log:
Iron out in code what was mentioned in README.source (so no real need to
mention it any more, thought)
Deleted: trunk/packages/trimmomatic/trunk/debian/README.source
===================================================================
--- trunk/packages/trimmomatic/trunk/debian/README.source 2012-07-23
10:24:29 UTC (rev 11871)
+++ trunk/packages/trimmomatic/trunk/debian/README.source 2012-07-23
14:00:08 UTC (rev 11872)
@@ -1,4 +0,0 @@
-The following files and directories where removed from the source tree:
-trimmomatic-0.22/lib/jbzip2-0.9.jar
-trimmomatic-0.22/old
-
Added: trunk/packages/trimmomatic/trunk/debian/get-orig-source
===================================================================
--- trunk/packages/trimmomatic/trunk/debian/get-orig-source
(rev 0)
+++ trunk/packages/trimmomatic/trunk/debian/get-orig-source 2012-07-23
14:00:08 UTC (rev 11872)
@@ -0,0 +1,31 @@
+#!/bin/sh
+# get source for beast-mcmc from SVN because there is no source tarball
distribution
+
+set -e
+NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
+UNAME=`echo $NAME | sed -e 's/^t/T/' -e 's/$/-Src/'`
+
+if ! echo $@ | grep -q upstream-version ; then
+ VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed
's/\([0-9\.]\+\)-[0-9]\+$/\1/'`
+ uscan --force-download
+else
+ VERSION=`echo $@ | sed "s?^.*--upstream-version \([0-9.]\+\)
.*${UAME}.*?\1?"`
+ if echo "$VERSION" | grep -q "upstream-version" ; then
+ echo "Unable to parse version number"
+ exit
+ fi
+fi
+
+TARDIR=${NAME}-${VERSION}
+
+mkdir -p ../tarballs
+cd ../tarballs
+unzip -q ../${UNAME}-${VERSION}.zip
+
+# clean up unneeded binary jars
+rm -rf ${TARDIR}/lib/*.jar
+# No need to keep copies of old code
+rm -rf ${TARDIR}/old
+
+GZIP="--best --no-name" tar --owner=root --group=root --mode=a+rX -caf
"$NAME"_"$VERSION".orig.tar.gz "${TARDIR}"
+rm -rf "${TARDIR}"
Property changes on: trunk/packages/trimmomatic/trunk/debian/get-orig-source
___________________________________________________________________
Added: svn:executable
+ *
Modified: trunk/packages/trimmomatic/trunk/debian/rules
===================================================================
--- trunk/packages/trimmomatic/trunk/debian/rules 2012-07-23 10:24:29 UTC
(rev 11871)
+++ trunk/packages/trimmomatic/trunk/debian/rules 2012-07-23 14:00:08 UTC
(rev 11872)
@@ -14,4 +14,5 @@
ant
get-orig-source:
- uscan --verbose --force-download --repack --rename
+ # uscan --verbose --force-download --repack --rename
+ . debian/get-orig-source
Modified: trunk/packages/trimmomatic/trunk/debian/watch
===================================================================
--- trunk/packages/trimmomatic/trunk/debian/watch 2012-07-23 10:24:29 UTC
(rev 11871)
+++ trunk/packages/trimmomatic/trunk/debian/watch 2012-07-23 14:00:08 UTC
(rev 11872)
@@ -1,3 +1,4 @@
version=3
http://www.usadellab.org/cms/index.php?page=trimmomatic \
- uploads/supplementary/Trimmomatic/Trimmomatic-Src-([.\d]*).zip
+ uploads/supplementary/Trimmomatic/Trimmomatic-Src-([.\d]*).zip \
+ debian debian/get-orig-source
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