Package: wnpp Severity: wishlist Owner: Steffen Moeller <moel...@debian.org> X-Debbugs-Cc: debian-devel@lists.debian.org, moel...@debian.org
* Package name : python-isovar Version : 0.7.0 * URL : https://github.com/openvax/isovar * License : Apache-2.0 Programming Lang: Python Description : determines mutant protein subsequences around mutations from cancer RNAseq data Isovar determines mutant protein subsequences around mutations from cancer RNAseq data. . Isovar works by: * collecting RNA reads which spanning the location of a variant, * filtering the RNA reads to those which support the mutation, * assembling mutant reads into longer coding sequences, * matching mutant coding sequences against reference annotated reading frames, and * translating coding sequences determined directly from RNA into * mutant protein sequences. . The assembled coding sequences may incorporate proximal (germline and somatic) variants, along with any splicing alterations which occur due to modified splice signals. The project will be team-maintained at https://salsa.debian.org/med-team/python-isovar .
