Package: wnpp Severity: wishlist Owner: Alexandre Mestiashvili <a...@biotec.tu-dresden.de>
* Package name : bowtie2 Version : 2.0.0-beta5 Upstream Author : Ben Langmead <blang...@jhsph.edu> * URL : http://bowtie-bio.sourceforge.net/bowtie2/ * License : GPL Programming Lang: C++, Perl Description : ultrafast memory-efficient short read aligner is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. . Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20120221162458.15497.26302.reportbug@sid
