Your message dated Fri, 19 Dec 2025 15:36:17 +0000
with message-id <[email protected]>
and subject line Bug#1113360: fixed in openms 2.6.0+cleaned1-5
has caused the Debian Bug report #1113360,
regarding openms: FTBFS with CMake 4
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1113360: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1113360
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: openms
Version: 2.6.0+cleaned1-4
Severity: serious
User: [email protected]
Usertags: cmake-4
Tags: ftbfs, forky, sid
Dear maintainer,
During a test rebuild for CMake 4, openms failed to rebuild.
Log Summary:
-------------------------------------------------------------------------------
[...]
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dh_auto_configure: error: cd obj-aarch64-linux-gnu &&
DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake
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-DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian ..
returned exit code 1
make[1]: *** [debian/rules:62: override_dh_auto_configure] Error 2
make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1'
make: *** [debian/rules:43: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2025-08-30T11:52:30Z
-------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here (for the next 30 days):
https://debusine.debian.net/artifact/2406244/
The most likely cause of build failures is the removed backwards compatibility
for
CMake versions earlier than 3.5. You can find additional information in my
debian-devel announcement:
https://lists.debian.org/debian-devel/2025/04/msg00310.html
About the archive rebuild: The build was made on debusine.debian.net,
using sbuild.
You can find the build task here:
https://debusine.debian.net/work-request/154350/
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks,
Timo
--- End Message ---
--- Begin Message ---
Source: openms
Source-Version: 2.6.0+cleaned1-5
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
openms, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated openms package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 19 Dec 2025 09:36:55 +0100
Source: openms
Architecture: source
Version: 2.6.0+cleaned1-5
Distribution: unstable
Urgency: medium
Maintainer: The Debichem Group <[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1068052 1113360
Changes:
openms (2.6.0+cleaned1-5) unstable; urgency=medium
.
* Team upload.
.
[ Adrian Bunk ]
* Fix FTBFS with CMake 4. (Closes: #1113360)
.
[ Andreas Tille ]
* Build-Depends: architecture-is-64-bit
Closes: #1068052
* d/watch:
- version=5
- Fix upstream source
* Standards-Version: 4.7.2 (routine-update)
* Remove trailing whitespace in debian/changelog (routine-update)
* Remove trailing whitespace in debian/copyright (routine-update)
* Remove trailing whitespace in debian/rules (routine-update)
* Trim trailing whitespace.
* Use secure URI in Homepage field.
* Update renamed lintian tag names in lintian overrides.
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