Package: src:python-loompy Version: 3.0.7+dfsg-4 Severity: serious Tags: ftbfs forky sid
Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202512/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:python-loompy, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.14 3.13" I: pybuild base:317: python3.14 setup.py clean running clean removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it I: pybuild base:317: python3.13 setup.py clean running clean removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-loompy.substvars debian/files rm -fr -- debian/python3-loompy/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.14 3.13" I: pybuild base:317: python3.14 setup.py config running config I: pybuild base:317: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.14 3.13" I: pybuild base:317: /usr/bin/python3.14 setup.py build running build running build_py creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/metadata_loaders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/global_attribute_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/to_html.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/cell_calling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/attribute_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/normalize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/loom_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/layer_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/loompy.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/loom_view.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/loom_layer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/graph_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/commands.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/bus_file.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/view_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy copying loompy/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/loompy I: pybuild base:317: /usr/bin/python3 setup.py build running build running build_py creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/metadata_loaders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/global_attribute_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/to_html.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/cell_calling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/attribute_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/normalize.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/layer_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loompy.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_view.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_layer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/graph_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/commands.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/bus_file.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/view_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.14 3.13" I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build; python3.14 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.14.2, pytest-9.0.2, pluggy-1.6.0 rootdir: /<<PKGBUILDDIR>> plugins: typeguard-4.4.4 collected 0 items / 5 errors ==================================== ERRORS ==================================== _ ERROR collecting .pybuild/cpython3_3.14_loompy/build/tests/test_attribute_manager.py _ ImportError while importing test module '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/tests/test_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in <module> from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.14/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/test_attribute_manager.py:3: in <module> from loompy import AttributeManager loompy/__init__.py:14: in <module> from .bus_file import create_from_fastq loompy/bus_file.py:14: in <module> from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:77: in <module> from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in <module> from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in <module> from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:10: in <module> from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in <module> from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in <module> raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.14_loompy/build/tests/test_connection.py _ ImportError while importing test module '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/tests/test_connection.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in <module> from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.14/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/test_connection.py:6: in <module> import loompy loompy/__init__.py:14: in <module> from .bus_file import create_from_fastq loompy/bus_file.py:14: in <module> from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:77: in <module> from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in <module> from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in <module> from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:10: in <module> from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in <module> from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in <module> raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.14_loompy/build/tests/test_file_attribute_manager.py _ ImportError while importing test module '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/tests/test_file_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in <module> from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.14/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/test_file_attribute_manager.py:8: in <module> from loompy import GlobalAttributeManager loompy/__init__.py:14: in <module> from .bus_file import create_from_fastq loompy/bus_file.py:14: in <module> from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:77: in <module> from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in <module> from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in <module> from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:10: in <module> from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in <module> from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in <module> raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported ___ ERROR collecting .pybuild/cpython3_3.14_loompy/build/tests/test_main.py ____ ImportError while importing test module '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/tests/test_main.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in <module> from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.14/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/test_main.py:1: in <module> import loompy loompy/__init__.py:14: in <module> from .bus_file import create_from_fastq loompy/bus_file.py:14: in <module> from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:77: in <module> from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in <module> from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in <module> from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:10: in <module> from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in <module> from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in <module> raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.14_loompy/build/tests/test_validator.py _ ImportError while importing test module '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build/tests/test_validator.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in <module> from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.14/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/test_validator.py:6: in <module> import loompy loompy/__init__.py:14: in <module> from .bus_file import create_from_fastq loompy/bus_file.py:14: in <module> from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:77: in <module> from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in <module> from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in <module> from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:10: in <module> from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in <module> from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in <module> raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported =========================== short test summary info ============================ ERROR tests/test_attribute_manager.py ERROR tests/test_connection.py ERROR tests/test_file_attribute_manager.py ERROR tests/test_main.py ERROR tests/test_validator.py !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! ============================== 5 errors in 0.74s =============================== E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_loompy/build; python3.14 -m pytest tests I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.11, pytest-9.0.2, pluggy-1.6.0 rootdir: /<<PKGBUILDDIR>> plugins: typeguard-4.4.4 collected 7 items tests/test_attribute_manager.py .. [ 28%] tests/test_connection.py . [ 42%] tests/test_file_attribute_manager.py . [ 57%] tests/test_main.py .. [ 85%] tests/test_validator.py . [100%] =============================== warnings summary =============================== .pybuild/cpython3_3.13_loompy/build/tests/test_connection.py: 7 warnings .pybuild/cpython3_3.13_loompy/build/tests/test_main.py: 22 warnings .pybuild/cpython3_3.13_loompy/build/tests/test_validator.py: 1 warning /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_loompy/build/loompy/utils.py:15: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). return datetime.datetime.utcnow().strftime("%Y%m%dT%H%M%S.%fZ") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================== 7 passed, 30 warnings in 1.19s ======================== rm -fr -- /tmp/dh-xdg-rundir-OYADaoLF dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13 make: *** [debian/rules:7: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 --------------------------------------------------------------------------------
