Package: src:tomoscan Version: 2.3.1-2 Severity: serious Tags: ftbfs forky sid
Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202512/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:tomoscan, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:131: Building wheel for python3.14 with "build" module I: pybuild base:317: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_tomoscan * Building wheel... /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated [... snipped ...] adding 'build/lib/tomoscan/utils/__init__.py' adding 'build/lib/tomoscan/utils/decorator.py' adding 'build/lib/tomoscan/utils/geometry.py' adding 'build/lib/tomoscan/utils/hdf5.py' adding 'build/lib/tomoscan/utils/io.py' adding 'build/lib/tomoscan/utils/volume.py' adding 'build/lib/tomoscan/utils/drac/__init__.py' adding 'build/lib/tomoscan/utils/drac/mapper.py' adding 'build/lib/tomoscan/utils/drac/recons_vol_mapping.py' adding 'doc/conf.py' adding 'snippets/test_sinogram.py' adding 'tomoscan/_CoordinateSystem.py' adding 'tomoscan/__init__.py' adding 'tomoscan/factory.py' adding 'tomoscan/framereducerbase.py' adding 'tomoscan/identifier.py' adding 'tomoscan/io.py' adding 'tomoscan/progress.py' adding 'tomoscan/scanbase.py' adding 'tomoscan/scanfactory.py' adding 'tomoscan/serie.py' adding 'tomoscan/series.py' adding 'tomoscan/source.py' adding 'tomoscan/test.py' adding 'tomoscan/tomoobject.py' adding 'tomoscan/validator.py' adding 'tomoscan/version.py' adding 'tomoscan/volumebase.py' adding 'tomoscan/esrf/__init__.py' adding 'tomoscan/esrf/edfscan.py' adding 'tomoscan/esrf/hdf5scan.py' adding 'tomoscan/esrf/mock.py' adding 'tomoscan/esrf/utils.py' adding 'tomoscan/esrf/identifier/__init__.py' adding 'tomoscan/esrf/identifier/edfidentifier.py' adding 'tomoscan/esrf/identifier/folderidentifier.py' adding 'tomoscan/esrf/identifier/hdf5Identifier.py' adding 'tomoscan/esrf/identifier/jp2kidentifier.py' adding 'tomoscan/esrf/identifier/rawidentifier.py' adding 'tomoscan/esrf/identifier/tiffidentifier.py' adding 'tomoscan/esrf/identifier/url_utils.py' adding 'tomoscan/esrf/identifier/tests/test_edfidentifier.py' adding 'tomoscan/esrf/identifier/tests/test_hdf5identifier.py' adding 'tomoscan/esrf/identifier/tests/test_rawidentifier.py' adding 'tomoscan/esrf/scan/__init__.py' adding 'tomoscan/esrf/scan/edfscan.py' adding 'tomoscan/esrf/scan/fscan.py' adding 'tomoscan/esrf/scan/fscan_scantypes.py' adding 'tomoscan/esrf/scan/h5utils.py' adding 'tomoscan/esrf/scan/hdf5scan.py' adding 'tomoscan/esrf/scan/mock.py' adding 'tomoscan/esrf/scan/nxtomoscan.py' adding 'tomoscan/esrf/scan/utils.py' adding 'tomoscan/esrf/scan/framereducer/__init__.py' adding 'tomoscan/esrf/scan/framereducer/edfframereducer.py' adding 'tomoscan/esrf/scan/framereducer/hdf5framereducer.py' adding 'tomoscan/esrf/scan/framereducer/tests/test_edfframereducer.py' adding 'tomoscan/esrf/scan/framereducer/tests/test_hdf5framereducer.py' adding 'tomoscan/esrf/scan/tests/test_edfscan.py' adding 'tomoscan/esrf/scan/tests/test_fscan.py' adding 'tomoscan/esrf/scan/tests/test_mock.py' adding 'tomoscan/esrf/scan/tests/test_nxtomoscan.py' adding 'tomoscan/esrf/scan/tests/test_nxtomoscan_mcstas.py' adding 'tomoscan/esrf/scan/tests/test_utils.py' adding 'tomoscan/esrf/volume/__init__.py' adding 'tomoscan/esrf/volume/edfvolume.py' adding 'tomoscan/esrf/volume/hdf5volume.py' adding 'tomoscan/esrf/volume/jp2kvolume.py' adding 'tomoscan/esrf/volume/mock.py' adding 'tomoscan/esrf/volume/rawvolume.py' adding 'tomoscan/esrf/volume/singleframebase.py' adding 'tomoscan/esrf/volume/tiffvolume.py' adding 'tomoscan/esrf/volume/utils.py' adding 'tomoscan/esrf/volume/helpers/__init__.py' adding 'tomoscan/esrf/volume/helpers/single_frame_saver.py' adding 'tomoscan/esrf/volume/helpers/test/test_single_frame_saver.py' adding 'tomoscan/esrf/volume/tests/test_edfvolume.py' adding 'tomoscan/esrf/volume/tests/test_hdf5volume.py' adding 'tomoscan/esrf/volume/tests/test_jp2kvolume.py' adding 'tomoscan/esrf/volume/tests/test_raw_volume.py' adding 'tomoscan/esrf/volume/tests/test_single_frame_volume.py' adding 'tomoscan/esrf/volume/tests/test_tiffvolume.py' adding 'tomoscan/esrf/volume/tests/test_volume_esrf_utils.py' adding 'tomoscan/framereducer/ReduceFrameSaver.py' adding 'tomoscan/framereducer/__init__.py' adding 'tomoscan/framereducer/framereducerbase.py' adding 'tomoscan/framereducer/method.py' adding 'tomoscan/framereducer/reducedframesinfos.py' adding 'tomoscan/framereducer/target.py' adding 'tomoscan/framereducer/tests/test_ReduceFrameSaver.py' adding 'tomoscan/framereducer/tests/test_framereducerbase.py' adding 'tomoscan/nexus/__init__.py' adding 'tomoscan/nexus/paths/__init__.py' adding 'tomoscan/nexus/paths/nxdetector.py' adding 'tomoscan/nexus/paths/nxinstrument.py' adding 'tomoscan/nexus/paths/nxmonitor.py' adding 'tomoscan/nexus/paths/nxsample.py' adding 'tomoscan/nexus/paths/nxsource.py' adding 'tomoscan/nexus/paths/nxtomo.py' adding 'tomoscan/nexus/paths/nxtransformations.py' adding 'tomoscan/nexus/utils/__init__.py' adding 'tomoscan/normalization/__init__.py' adding 'tomoscan/normalization/calculationmode.py' adding 'tomoscan/normalization/datasetscope.py' adding 'tomoscan/normalization/method.py' adding 'tomoscan/normalization/methodmode.py' adding 'tomoscan/normalization/normalization.py' adding 'tomoscan/normalization/tests/test_normalization.py' adding 'tomoscan/tests/__init__.py' adding 'tomoscan/tests/conftest.py' adding 'tomoscan/tests/datasets.py' adding 'tomoscan/tests/test_drac_utils.py' adding 'tomoscan/tests/test_factory.py' adding 'tomoscan/tests/test_hdf5_utils.py' adding 'tomoscan/tests/test_io.py' adding 'tomoscan/tests/test_progress.py' adding 'tomoscan/tests/test_scanbase.py' adding 'tomoscan/tests/test_serie.py' adding 'tomoscan/tests/test_tomoobject.py' adding 'tomoscan/tests/test_utils.py' adding 'tomoscan/tests/test_validator.py' adding 'tomoscan/tests/test_version.py' adding 'tomoscan/tests/test_volume_base.py' adding 'tomoscan/tests/test_volume_utils.py' adding 'tomoscan/tests/utils.py' adding 'tomoscan/utils/__init__.py' adding 'tomoscan/utils/decorator.py' adding 'tomoscan/utils/geometry.py' adding 'tomoscan/utils/hdf5.py' adding 'tomoscan/utils/io.py' adding 'tomoscan/utils/volume.py' adding 'tomoscan/utils/drac/__init__.py' adding 'tomoscan/utils/drac/mapper.py' adding 'tomoscan/utils/drac/recons_vol_mapping.py' adding 'tomoscan-2.3.1.dist-info/licenses/LICENSE' adding 'tomoscan-2.3.1.dist-info/METADATA' adding 'tomoscan-2.3.1.dist-info/WHEEL' adding 'tomoscan-2.3.1.dist-info/entry_points.txt' adding 'tomoscan-2.3.1.dist-info/top_level.txt' adding 'tomoscan-2.3.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Successfully built tomoscan-2.3.1-py3-none-any.whl I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_tomoscan/build; python3.14 -m pytest Fatal Python error: Aborted Current thread 0x00007f2463f96200 [python3.14] (most recent call first): File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_tomoscan/build/snippets/test_sinogram.py", line 119 in <module> File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 186 in exec_module File "<frozen importlib._bootstrap>", line 938 in _load_unlocked File "<frozen importlib._bootstrap>", line 1342 in _find_and_load_unlocked File "<frozen importlib._bootstrap>", line 1371 in _find_and_load File "<frozen importlib._bootstrap>", line 1398 in _gcd_import File "/usr/lib/python3.14/importlib/__init__.py", line 88 in import_module File "/usr/lib/python3/dist-packages/_pytest/pathlib.py", line 587 in import_path File "/usr/lib/python3/dist-packages/_pytest/python.py", line 498 in importtestmodule File "/usr/lib/python3/dist-packages/_pytest/python.py", line 551 in _getobj File "/usr/lib/python3/dist-packages/_pytest/python.py", line 280 in obj File "/usr/lib/python3/dist-packages/_pytest/python.py", line 567 in _register_setup_module_fixture File "/usr/lib/python3/dist-packages/_pytest/python.py", line 554 in collect File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 389 in collect File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 344 in from_call File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 391 in pytest_make_collect_report File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 567 in collect_one_node File "/usr/lib/python3/dist-packages/_pytest/main.py", line 839 in _collect_one_node File "/usr/lib/python3/dist-packages/_pytest/main.py", line 974 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 979 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 979 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 813 in perform_collect File "/usr/lib/python3/dist-packages/_pytest/main.py", line 353 in pytest_collection File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/main.py", line 342 in _main File "/usr/lib/python3/dist-packages/_pytest/main.py", line 289 in wrap_session File "/usr/lib/python3/dist-packages/_pytest/main.py", line 336 in pytest_cmdline_main File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 175 in main File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 201 in console_main File "/usr/lib/python3/dist-packages/pytest/__main__.py", line 9 in <module> File "<frozen runpy>", line 88 in _run_code File "<frozen runpy>", line 198 in _run_module_as_main Current thread's C stack trace (most recent call first): Binary file "python3.14", at _Py_DumpStack+0x4a [0x472522] Binary file "python3.14" [0x4fc6c7] Binary file "/usr/lib/x86_64-linux-gnu/libc.so.6", at +0x40590 [0x7f2463c40590] Binary file "/usr/lib/x86_64-linux-gnu/libc.so.6", at +0x9569c [0x7f2463c9569c] Binary file "/usr/lib/x86_64-linux-gnu/libc.so.6", at gsignal+0x12 [0x7f2463c40462] Binary file "/usr/lib/x86_64-linux-gnu/libc.so.6", at abort+0x22 [0x7f2463c284ac] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Core.so.5", at +0x92514 [0x7f245c692514] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Gui.so.5", at _ZN22QGuiApplicationPrivate25createPlatformIntegrationEv+0x17bf [0x7f245933d31f] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Gui.so.5", at _ZN22QGuiApplicationPrivate21createEventDispatcherEv+0x38 [0x7f245933d858] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Core.so.5", at _ZN23QCoreApplicationPrivate4initEv+0x8f5 [0x7f245c8f05c5] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Gui.so.5", at _ZN22QGuiApplicationPrivate4initEv+0x2e [0x7f245934090e] Binary file "/usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5", at _ZN19QApplicationPrivate4initEv+0xd [0x7f2458168a5d] Binary file "/usr/lib/python3/dist-packages/PyQt5/QtWidgets.abi3.so", at +0x3b6b8d [0x7f2458bb6b8d] Binary file "/usr/lib/python3/dist-packages/PyQt5/QtWidgets.abi3.so", at +0x3b6c69 [0x7f2458bb6c69] Binary file "/usr/lib/python3/dist-packages/PyQt5/sip.cpython-314-x86_64-linux-gnu.so", at +0x1c6f1 [0x7f245cbf36f1] Binary file "python3.14", at _PyObject_MakeTpCall+0x282 [0x526f92] Binary file "python3.14", at _PyEval_EvalFrameDefault+0x3607 [0x548757] Binary file "python3.14", at PyEval_EvalCode+0xf1 [0x53ffa1] Binary file "python3.14" [0x696957] Binary file "python3.14", at _PyEval_EvalFrameDefault+0x3421 [0x548571] Binary file "python3.14" [0x583944] Binary file "python3.14" [0x58e15e] Binary file "python3.14", at _PyObject_GenericGetAttrWithDict+0xfc [0x56c80c] Binary file "python3.14", at PyObject_GetAttr+0x42 [0x52dbc2] Binary file "python3.14", at _PyEval_EvalFrameDefault+0x9e9 [0x545b39] Binary file "python3.14" [0x583944] Binary file "python3.14" [0x52e8be] Binary file "python3.14" [0x626aff] Binary file "python3.14", at _PyObject_MakeTpCall+0x36c [0x52707c] Binary file "python3.14", at _PyEval_EvalFrameDefault+0x63eb [0x54b53b] Binary file "python3.14" [0x5c1080] Binary file "python3.14" [0x5bdf30] <truncated rest of calls> Extension modules: h5py._debian_h5py_serial._errors, h5py._d [too-long-redacted] q, tornado.speedups (total: 77) Aborted E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=134: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_tomoscan/build; python3.14 -m pytest I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tomoscan/build; python3.13 -m pytest Fatal Python error: Aborted Current thread 0x00007f1215f76200 (most recent call first): File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tomoscan/build/snippets/test_sinogram.py", line 119 in <module> File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 186 in exec_module File "<frozen importlib._bootstrap>", line 935 in _load_unlocked File "<frozen importlib._bootstrap>", line 1331 in _find_and_load_unlocked File "<frozen importlib._bootstrap>", line 1360 in _find_and_load File "<frozen importlib._bootstrap>", line 1387 in _gcd_import File "/usr/lib/python3.13/importlib/__init__.py", line 88 in import_module File "/usr/lib/python3/dist-packages/_pytest/pathlib.py", line 587 in import_path File "/usr/lib/python3/dist-packages/_pytest/python.py", line 498 in importtestmodule File "/usr/lib/python3/dist-packages/_pytest/python.py", line 551 in _getobj File "/usr/lib/python3/dist-packages/_pytest/python.py", line 280 in obj File "/usr/lib/python3/dist-packages/_pytest/python.py", line 567 in _register_setup_module_fixture File "/usr/lib/python3/dist-packages/_pytest/python.py", line 554 in collect File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 389 in collect File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 344 in from_call File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 391 in pytest_make_collect_report File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 567 in collect_one_node File "/usr/lib/python3/dist-packages/_pytest/main.py", line 839 in _collect_one_node File "/usr/lib/python3/dist-packages/_pytest/main.py", line 974 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 979 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 979 in genitems File "/usr/lib/python3/dist-packages/_pytest/main.py", line 813 in perform_collect File "/usr/lib/python3/dist-packages/_pytest/main.py", line 353 in pytest_collection File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/main.py", line 342 in _main File "/usr/lib/python3/dist-packages/_pytest/main.py", line 289 in wrap_session File "/usr/lib/python3/dist-packages/_pytest/main.py", line 336 in pytest_cmdline_main File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 121 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 512 in __call__ File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 175 in main File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 201 in console_main File "/usr/lib/python3/dist-packages/pytest/__main__.py", line 9 in <module> File "<frozen runpy>", line 88 in _run_code File "<frozen runpy>", line 198 in _run_module_as_main Extension modules: h5py._debian_h5py_serial._errors, h5py._d [too-long-redacted] q, tornado.speedups (total: 77) Aborted E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=134: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_tomoscan/build; python3.13 -m pytest dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13 make: *** [debian/rules:5: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 --------------------------------------------------------------------------------
